Coprococcus sp. ART55/1: CCU_19160
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Entry
CCU_19160 CDS
T02583
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
coo
Coprococcus sp. ART55/1
Pathway
coo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCU_19160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_19160
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCU_19160
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCU_19160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
UB2H
Phage_Mu_Gp48
DUF87
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
CBK83395
LinkDB
All DBs
Position
complement(2004946..2006934)
Genome browser
AA seq
662 aa
AA seq
DB search
MDHFELVSEYKPTGDQPEAIEKLVKGFQEGNQFETLLGVTGSGKTFTMANVIQQLNKPTL
ILAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVASTDTYIAKDSSINDDIDR
MRHSATAALIDRKDVIVVASVSCIYGIGDPDEYRNQMLSFRVGMIKDRDQVIDELTDIQY
DRNDMDLQRGTFRVRGDVLEIIPVSTFDDGIRIEFFGDEIDRITEFDPLTGEGKRDLTYT
CLFPASHYVVGQEKMEKALKRIEAELKDRVAYFKSKDKLIEAQRIEERTNFDMEMMRETG
FCSGIENYSGPLAGRSAGETPSTLLDFFDDDFLLIIDESHMTVPQVGAMYSGDRSRKMNL
VDYGFRLPSALDNRPLNFSEFEQKLDQVMFVSATPGKYEEEHQMLMAEQIIRPTGLLDPP
VEVRPVEGQIDDLLKEVRKETEQGHKVLVTTLTKRMAEDLTSYMRDNDIKVKYLHSDIDT
MERVEIVRDLRLGVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGHVIMYADTITGSMKYALDETSRRREIQQKYNEEHGITPKTIEKSIRDLITIEVK
KEELPDEDKDAESMTKKELQKVIAKLTKKMNMAAADLNFEVAAEIRDQLKVYKAALRDYD
KE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaattggtatcggaatacaagcccaccggagatcagccggaggcaata
gaaaaattggtaaagggttttcaggaaggtaatcagtttgagacgctgctgggtgtaacc
ggatctggtaagacttttaccatggcgaatgtcatacagcagctgaataagcccacgctt
atacttgcacataacaagactctggcggcgcagctttatggggagatgaaagaatttttc
ccgaacaatgcggtggagtattttgtatcatactacgattattatcagccggaagcatat
gtggcgtctacggatacttatattgcaaaggattcgtctattaatgacgatattgaccgg
atgagacatagcgccacagcagcactcatagacagaaaggatgtcatagtggttgcatct
gtatcgtgtatatatggcatcggtgatccggacgagtacaggaatcagatgttgtcgttt
agagttggcatgataaaggacagagatcaggtcatcgatgaactgacagatatacagtat
gacaggaatgacatggatctgcagagaggcacattcagagtgcgtggggatgtacttgag
ataattcctgtgtcaacatttgacgatggaataaggatagagttttttggtgatgagata
gacaggatcacagagtttgatccgctcactggagagggaaagagggatctgacatatacc
tgtctgttcccggcgtcccactatgtggttggacaggagaagatggagaaggcactgaag
aggatagaggcggagctcaaggacagagttgcttacttcaagtcaaaggataaactcatc
gaggcacagcgtatcgaggagagaactaactttgatatggagatgatgagagagactgga
ttttgctctggtatagagaactattccggtccgctggctggaagatcagccggagagacg
ccgagcacacttctggatttctttgatgatgactttcttcttattatagatgagtcacat
atgactgtgcctcaggttggcgcgatgtattcgggagaccgatcccgtaagatgaatctg
gttgactatggattcaggcttccatctgcacttgacaacaggccgctcaacttctcggaa
tttgagcagaagctggatcaggtcatgttcgtatctgccacaccgggcaaatacgaggag
gaacaccagatgctcatggctgaacagatcatcagacctacgggacttctggatccgccg
gttgaggtcagaccggttgagggacagatagatgatctgctgaaagaggtccgcaaggag
actgagcagggacacaaggtgcttgtaacaacacttaccaagcgtatggctgaagatctc
accagctatatgagggataatgatataaaggtgaaatatctgcactcggatatagacact
atggagagggttgagatagtgagagatctccgtcttggcgtatttgatgtgcttgttgga
atcaaccttctgagagagggacttgatataccggagatcactctggtggcaatactggat
gctgataaggaaggtttcctgagatcggagacatcactcatccagaccataggaagagca
gcccgaaatgtggatggacatgtcatcatgtatgcggatactatcacgggttctatgaag
tatgccctcgatgagacgagcagacgtcgtgagatacagcagaagtataatgaggaacat
ggaataacccctaagactatagagaagagcataagggatctcataaccatagaggtgaag
aaggaggaacttccagatgaggataaggacgctgagtccatgacgaagaaggagcttcag
aaggttatcgccaagctgaccaagaagatgaatatggcggcagcagacctcaactttgag
gtggcggcagagatcagggatcagctcaaggtgtataaggcggcactgagagattatgat
aaagaatag
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