Coprococcus sp. ART55/1: CCU_24790
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Entry
CCU_24790 CDS
T02583
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
coo
Coprococcus sp. ART55/1
Pathway
coo03030
DNA replication
coo03430
Mismatch repair
coo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCU_24790
03430 Mismatch repair
CCU_24790
03440 Homologous recombination
CCU_24790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coo03032
]
CCU_24790
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_24790
Enzymes [BR:
coo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCU_24790
DNA replication proteins [BR:
coo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCU_24790
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCU_24790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
HHH_6
Rv2179c-like
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
DEDDh_C
HHH_5
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CBK83833
LinkDB
All DBs
Position
2622120..2626931
Genome browser
AA seq
1603 aa
AA seq
DB search
MYADEMQTQMDYEAQMAEQEMYESQMYADMQQESASYTQADVHDSDWHIADDMEEDAEDE
DVVSDGSATAVSDAGNEQAELFMTVFPGVEMTKELAGLFTEVYVTKVTIYDSKNILQVDI
RSRHIISRPNIEKAEECIRKFVFGNKRYTVQIREHYTLSTQYNLEAIVKAYQDSILYDIR
SFSNVGYRLISRSIGELYCDGDAITIAIEDSKIAHIHAEKIKAYMEEMFQERFDLNVNVA
FEYSEADKEKLRRASALVEQQKIDAILNNLRDHGDIIVDGKAVDKDKLGVSKKEDKKSEG
HKPDEKKAAPASSGGDSGQKNGGEKEKFGRRRRYSDDPEVFIGRDVEGKLLEISSINDGI
GEVVIHGQIMSTEERELRNGKIILTGYITDFTDTIGFKMFCSPEDMEVYREEIQKGKFYR
MKGLAEFDSYAKEVMICRVLGMKHIQDFRVPRMDTYPEKRVELHMHTKMSEMDSVVDIET
IVKRASDWGHPAIAITDHGVVQAFPIANHTKGLRKDFKIIYGVEGYFVDDLKDLVKNSRN
QSLDSEYVVFDIETTGLSKKHNKIIEIGAVKVKDGEVVDTFSEFINPGVPIPYQIEQLTS
INDDMVKDAPMFDVIVPRFVEFCGDDIVVAHNASFDTGFVRMNAEELGLKFDNTVLDTMT
LSHILLPELGKFTLDRVCKELKVVNAHHHRAIDDAEATAKVFFKLLDMLKERDVKTMDDL
NVLGSTSPDAIKKDKTYHGIILAKNEIGRVNLYRLISESHLTYFARRPRMPMSLINKYRE
GLIIGSACEAGELFCAIVDDASDEEIVRLVNWFDYLEIQPLGNNEFMTRDTRNPKTMDDL
IGYNKRIVELGEMFNKPVVATCDVHFLDPEDYIYRAIIMKSKGFDDADMQPPLYFRTTEE
MLAEFQYLGSDKAKEVVITNTNMIADMIERIEPVRPDKAPPIIENSDQTLTDICYTKAHE
IYGPDLPPQVQERLDRELHSIISNGFAVMYIIAQKLVWDSNDHGYLVGSRGSVGSSFVAT
MAGITEVNPLSAHYICPKCHFVDFDSELVKSYSGMSGCDMPDRDCPNCGTPLIKEGHDIP
FETFLGFNGDKEPDIDLNFSGEYQSKAHAYTEVLFGKGKAFKAGTVGGVAEKTAFGYVYN
YFKDHSKEELMAEAKASGMDEKSAKKYAEENATVTKRRCEMERLALGCTGVRRTTGQHPG
GMIVLPRHEEIYSFTPIQHPANDVTSDIITSHFEYHSIDHNLLKLDILGHDDPTMIRRLE
DLTGLDATKIRLDDKDVMELFHSTKSLGITPEDINGIPLGSLGVPEFGTDFAMQMLIDAK
PTCFSDLVRIAGLAHGTDVWLGNAQELIKSGKCTISTAICCRDDIMVYLIHMGLDAGLAF
NIMEKVRKGIVAKGKCDKWDDWKAEMAAHGVPDWYVWSCQKIKYMFPKAHAAAYVMMAWR
IAWFKVNYPLEYYTAFFSIRADDFSYEMMCFGKERVLFHINEISKVDKNKRSAKDEGKLK
DLKIVLEMYARGYDFVPIDIYKAKADRFQIIDGKIMPSFASIEGMGEKAAQQLYDAAQKG
PFLSKEEINERAKIGKGTIEKMSELGILDGMPETNQLSLFDFM
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccgatgagatgcagactcagatggattatgaagcccaaatggctgaacaggag
atgtatgagagccagatgtatgctgatatgcagcaggagagcgcatcgtacacccaggcg
gatgttcacgactcggactggcatatcgcagatgatatggaggaagatgccgaggacgaa
gacgtggtcagtgatggctctgcaacggcggtttcagatgccggaaatgagcaggcggag
ctcttcatgacggtgttccccggagtggagatgactaaggagcttgcaggtctgttcacc
gaggtgtatgtgacaaaagtcacgatatatgacagtaaaaatatcctgcaggttgacata
agatcgagacatataataagcagaccgaatatagaaaaggcggaggagtgtatccgtaag
tttgtatttggcaataaaaggtatacggtccagatacgggaacactatacactttctaca
cagtacaatctcgaagcaatagtcaaagcatatcaggacagcatactctacgatataaga
tcattcagcaatgtgggctacaggcttatatccagatcgataggagaactgtactgtgac
ggagacgcgataaccatagctatagaggacagtaagatagcgcatatacacgctgagaaa
ataaaggcgtatatggaggagatgttccaggagagatttgacctgaatgtcaatgttgca
tttgagtacagtgaggcggacaaggagaagctgaggagagccagtgcacttgttgagcag
cagaagatagatgccatattgaacaacctcagggatcatggcgacatcatcgtggatgga
aaggccgtggacaaggataagctcggagtgtcgaagaaggaagataagaagagcgaggga
cacaagcctgatgagaagaaggctgctcctgcatcctccggcggcgattcaggccagaaa
aatggcggtgaaaaggagaagttcggaagaaggcgaagatattcagatgatccagaggtg
ttcataggaagagatgtggagggcaagctgcttgagatatccagcatcaacgatggtatc
ggagaggtcgtcatccacggacagatcatgagcactgaggagagagagctccgaaatggc
aagatcatactgacgggatatataacagatttcacagacaccataggcttcaagatgttc
tgcagtcctgaggatatggaggtctaccgcgaggagatacagaagggtaagttctatagg
atgaagggccttgccgagttcgactcgtatgccaaggaggttatgatatgccgagtgctc
ggtatgaagcacattcaggactttcgtgtacctcgtatggatacatatcctgagaagcgt
gtcgagcttcacatgcataccaagatgagcgagatggacagcgtggtcgatatagagacc
atcgtgaagcgtgccagcgactggggacaccctgccatagcgatcacggatcacggtgtt
gttcaggctttccctatagcaaaccatacaaagggactcagaaaagatttcaagatcata
tatggtgtcgagggttactttgtcgatgacctgaaggatctggttaagaactcaaggaat
cagagccttgattcggaatacgtggtatttgatatagagacaacgggactttccaagaag
cacaacaagatcatagagatcggtgcggtcaaggtgaaggacggagaggtcgtagataca
ttctcggagtttataaatccgggtgtgcctatcccataccagatagaacagctcacatcc
ataaatgatgatatggtaaaggatgcgccgatgttcgatgtgatcgttccgagatttgtg
gagttctgcggtgacgatatcgtggttgcccacaatgcgtcatttgatacgggatttgtg
agaatgaatgcggaggagcttggacttaagttcgacaacacggttctggataccatgacg
ctcagccatatactgctgccggagcttggaaaattcactctggacagagtgtgtaaggaa
ctcaaagtcgtgaatgcgcatcaccacagagccatagacgatgcggaggccacggcgaaa
gtattcttcaagctgctcgacatgctgaaggagagagatgttaagaccatggatgatcta
aatgtccttggaagcacctcacctgatgcgatcaagaaggataagacatatcacggaatc
atcctggcaaagaacgagataggaagagtcaatctgtacaggctcatatctgagtcacat
ctgacatattttgcgcgaaggccgcgtatgccgatgagtctcatcaacaaatacagagag
ggtctgataataggctctgcctgtgaggcgggagagctgttctgtgccatagttgatgat
gcgtcggatgaggagatagtgagactggtcaactggtttgactaccttgagatacagccg
cttggcaacaatgaattcatgacgagggatacaaggaatccaaagaccatggacgatctg
atcggatacaacaagaggattgtggagctcggagagatgttcaacaagccagtggtcgca
acctgtgatgtgcatttccttgatcctgaggattatatatacagggcgatcatcatgaag
agcaagggctttgacgacgctgatatgcagccaccgctgtatttccgtaccacggaggag
atgctggcagagttccagtatcttggaagtgacaaggccaaggaagtcgtcatcacaaac
acgaatatgatagcggacatgatagagaggatagagccggtcagaccggacaaggcgcct
cctatcatcgagaattcggatcagacacttacggatatatgttataccaaggcacatgag
atatatggcccagacctgccacctcaggttcaggagagacttgacagggagctgcactcc
atcatttcaaatggatttgcggttatgtacatcatcgcacagaagcttgtgtgggattcc
aatgaccacggatatctggttggttcccgaggttcggttggatcttcatttgtcgcaaca
atggccggtatcacggaggtaaatccgctgtcggctcactatatctgtccgaaatgccac
tttgtggattttgattcagagcttgtaaagtcgtattcgggaatgagcggatgtgatatg
ccggacagagactgtccgaattgtggaacaccgcttataaaggaaggacacgatatacca
ttcgagacattccttggattcaacggagacaaggagcctgatatcgatctgaacttctcg
ggtgagtatcagtcgaaggcacatgcatacaccgaggtactcttcggcaagggcaaggca
ttcaaggcgggaaccgtaggtggtgttgcggaaaagacagcatttggatatgtgtacaat
tatttcaaggatcactccaaagaggagcttatggcggaggccaaggcatccggaatggat
gagaaatccgcgaagaagtacgctgaggagaatgcaacagttacaaagagaaggtgtgag
atggagcgtctggctcttggatgtactggtgtcagaagaactacgggtcagcatccgggt
ggtatgatagttctcccgagacacgaggagatatattcatttacacctatacagcacccg
gcaaatgatgtgacatcggatatcataacgtcacattttgagtaccattcaatcgatcat
aacctgctgaagctcgatattcttggacacgatgatccgaccatgatcaggcgtctggag
gatctgacgggacttgatgccacgaagataagacttgacgacaaggatgtcatggaattg
tttcacagcacaaagtcgctggggatcacaccggaggatatcaatgggatacctcttgga
agcctgggggtgccggagttcggaacagactttgctatgcagatgcttatagatgccaag
ccgacatgtttctcagatcttgtgcgaatagcgggtctggcgcatggaaccgatgtatgg
ctgggcaacgcgcaggagctcatcaagtcgggcaagtgtaccatatcgacagccatttgt
tgtcgtgacgatattatggtttatctgatacacatgggacttgatgccggacttgccttc
aacatcatggagaaggttcgtaagggaatagttgccaagggcaaatgtgacaaatgggat
gactggaaggcggagatggctgcccacggagtaccggactggtacgtatggtcatgtcag
aagatcaagtacatgttcccgaaggcccatgcggcggcctatgtcatgatggcgtggaga
attgcctggttcaaggtcaattatccgcttgaatactatacagcattcttcagtatcaga
gctgatgacttcagctatgagatgatgtgctttggcaaggagagagttctcttccatatc
aatgagataagcaaggtggacaagaacaagagatcagccaaggacgagggcaagctcaag
gatctgaagatagttctcgagatgtacgcaagaggctacgactttgttccaatagatata
tacaaggcaaaggctgacaggttccagataatagacggcaagatcatgccatccttcgca
tccatagaaggaatgggagagaaggctgcacagcagctctacgatgccgcccagaagggg
ccgttcctctctaaggaggagatcaatgagcgtgcaaagatcggcaagggaaccatcgag
aagatgagtgagctgggcatcctggacggaatgccggagacaaatcagctttcgctgttt
gactttatgtag
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integrated database retrieval system
