Coprococcus sp. ART55/1: CCU_29150
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Entry
CCU_29150 CDS
T02583
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
coo
Coprococcus sp. ART55/1
Brite
KEGG Orthology (KO) [BR:
coo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coo03400
]
CCU_29150
Enzymes [BR:
coo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCU_29150
DNA repair and recombination proteins [BR:
coo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CCU_29150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
T2SSE
ResIII
AAA_12
IMS
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CBK84096
LinkDB
All DBs
Position
complement(3099855..3103697)
Genome browser
AA seq
1280 aa
AA seq
DB search
MGKDMKTDNGIKWTDQQAHVIDTRHGNLLVSAAAGSGKTAVLVERIIEMVAGRNSRGDRI
EGSEPVSVDELLVVTFTNAAAAQMKEKIGQALQKKIDEMMAKGEYDEHLIKQMTLINHAD
ICTIDSFCLRIVKEYFARVELDCAFGIADDTEMKIIKHDVMDQVMEMCYEDESVVPGFDR
LIMTFARNESDSAVPDIVERIIKVISSYPEPKKWLAQAADAMKFAVDTSSTEEEKRREVM
GIPMVRTFADRVYMMLRTADDMVRECQKYATEAYGLEAYGLRVDKDVELITHMLRSCGGE
DDLHVDLFELRDIYRSSLRPEGLKMEKDAQGRSICYAFDRFVNPGGGADPEKKEFVKSRR
DVYKSIIDDIVSVVLDVDDILRQAAMTEPVISSLLKLTELYMDELMKVKMDKNMFEFHDI
EEFAFRILCDGIEDDRAVPSEIGKEVSRRYREILIDEYQDSNFLQEYILASVSGHGEDIH
NTFMVGDVKQSIYRFRMARPDLFIEKYDSYRRLGDADIADPDIDGNSILLTRNFRSEINV
LKTVNSIFAQLMRREIGDIEYDEGAKLNSRFAISDGEGMAEPDDVDHGPVSEFILIDNNM
READVSEEYGNPEVEANYIAGKIRDIVDGSEPLYVGSGADRRPVRYKDIVILLRSVSTAS
TIFDRVFQEKGIPLYIESESGYFDAAEIRTLVSMLSIVDNSYVDYDLAAVLRSPLVGLDE
EELAVIVGEYRSRYEKNGTDWNARLYDKVIDYMDTHVGEKKHAVDRLWEFLRMLDYLKKN
KNYMSISDIIRYVLDTTGFYWFVGARPMGRRRQANIDMLIKKADDFEENSKGVFNFIRYV
DELKTNDLDFAEADVVSENEDVVRVMTMHKSKGLEFPVVFVSGLGKEFNLMDTRSNVLVH
QDHYLACDQVDLRTRARRMTFFKRIMSKNIVAETYAEEMRVLYVALTRAKEKLYMTGCVK
DADKFKAACDMYIIGDRMNYASIMKANGYAAWIYTALRYVGECDHVKSIEVEADSFMSPE
TDQDEAENMTVEASEAKLDKELYDHVKNGLEFRYGYRHSGLKSKMSITEIKRLQAHGEDA
ITPDILTSREYSARSEVPIPAFMSEERIVHGNEIGNIYHKIMELADFSGKTVADAEKDVD
RVFELGLFDELYRERIRPKKIYKMIHSEIGQRMAAAGKSDRLYRERQFYMMMEPGEIMSS
LKDCGDETIVVQGIIDAYFEEDGGIVLLDYKTDSVKDASELVKRYHVQLDKYADVLEQLT
GMKVKEKVIYSFCLDTTVNL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagatatgaagactgacaatggaataaagtggacagaccagcaggcgcatgtc
atcgacacaaggcatggcaatcttcttgtatctgcagcagcgggatcaggtaagacggcg
gtgctcgtggagcgtatcatagagatggtggccggaagaaattcgcgtggtgacagaata
gagggaagcgagccggtatctgtggatgagcttcttgtcgttacatttacaaatgcggca
gcggcccagatgaaggagaagataggacaggcactgcagaaaaagatagatgagatgatg
gcgaagggcgaatatgacgagcatcttataaagcagatgacattgatcaaccatgctgac
atctgcaccatagacagcttttgccttaggatagtgaaggaatactttgcgagggtggag
ctcgactgtgcatttggcatagcggacgacacggagatgaagatcataaagcacgacgtg
atggatcaggtcatggagatgtgctatgaggatgaatcggtcgtgcccggtttcgacagg
ctgataatgacgtttgcgagaaatgagagtgacagtgccgtgccggatatcgttgagagg
ataataaaggttatatccagctatccggagccgaagaaatggcttgcgcaggcggcggat
gccatgaaatttgccgtggatacatcatccactgaggaggagaagagaagagaagtcatg
gggattccgatggtcagaacatttgcggacagggtgtacatgatgctcagaactgcggat
gatatggtcagggagtgccagaaatatgcaacggaggcgtatggccttgaggcgtacgga
ctccgtgtggataaggatgttgagctgataacacacatgctcagaagctgtggcggggaa
gacgacctgcatgttgacctgtttgaactcagagatatatacagatcgtcattgagaccg
gagggactcaagatggagaaggatgcccagggccggagtatatgctatgcatttgacaga
tttgtgaacccgggcggtggagctgacccggagaagaaggaatttgtcaaatcaaggcgg
gatgtgtataagtcgatcatagacgacatagtttcggtcgtcctggatgtggatgacatt
ctgaggcaggcagccatgactgagccagtgatatcatcacttttgaagctcactgagctt
tatatggatgagctgatgaaggtcaagatggacaagaatatgttcgagttccacgacata
gaggagttcgcattcaggatactttgcgatggaatagaggatgacagggctgtcccttca
gagattggaaaggaagtctcaaggcggtacagggagatacttatagatgagtatcaggac
agtaactttctgcaggaatacattctggcaagtgtgtcgggacacggtgaggatatccac
aacacattcatggtcggtgatgttaagcagagcatatacagattcagaatggcgagaccg
gatctgttcatagagaagtatgacagctaccgcaggctgggtgatgctgacatagcggac
ccggacatagatggcaacagcatactgctgaccagaaacttccgaagtgagataaatgtg
ttaaagacggtgaactcaatatttgcccagctcatgaggcgagagataggagacatagag
tacgatgagggcgcaaagctcaattccagatttgccataagtgacggagaagggatggcg
gagccggatgacgtggatcatggccctgtatcagagttcatactcatagacaacaatatg
agagaagcggatgtatctgaggagtatggcaatcctgaggttgaggcgaattatatcgcc
ggtaagatacgtgatattgtggacggaagtgaacctctgtatgttggaagtggtgctgac
aggagacctgtcagatataaggatatcgtcatactgcttagaagtgtgtccacagcatcc
accatatttgacagggtatttcaggagaagggcatacctctgtatattgagagtgagagt
ggctactttgatgctgctgagatacggacactggtcagcatgctctccatagttgataac
agctacgtggattacgacctggctgctgtcttaaggtcgccactggtaggccttgatgag
gaggagcttgcggttatagtgggtgaatatcgcagcagatacgagaagaacggcacggac
tggaacgccagactttatgacaaggtcatagattatatggacacccatgtgggcgagaaa
aaacacgctgtggacagactgtgggaattcctccgcatgcttgactatctcaagaagaat
aaaaattatatgtccataagcgacataataagatacgtgctggacaccaccggattttac
tggtttgtcggtgccagaccgatgggaagaagacgccaggcgaatatcgacatgctcatc
aagaaggcggatgatttcgaggagaacagcaagggcgtgttcaacttcatccgatatgtt
gatgagctcaagacaaatgatctggattttgcagaggctgatgtggtcagtgagaatgag
gacgtcgtccgagtcatgaccatgcacaagagcaagggactggagttccctgttgtattt
gtgtctgggctcggcaaggagtttaatctgatggacaccagatcaaatgtgcttgtccac
caggatcattatctggcgtgcgaccaggtcgacctcagaacaagagccagaagaatgaca
tttttcaagcggataatgagtaagaatatcgttgcggagacctatgccgaggagatgaga
gtcctgtatgtggcgttaaccagggcaaaggaaaagttgtacatgaccgggtgcgtgaag
gatgcagataaattcaaggcagcctgtgatatgtatataatcggagacaggatgaattat
gcatctatcatgaaagcaaatggctatgccgcctggatatataccgcgctcagatatgtg
ggagagtgcgatcatgtgaagagcatcgaggtggaggccgacagctttatgtctcctgag
actgatcaggatgaagcagaaaatatgacagtggaagcctctgaagcgaagctcgacaaa
gaactttatgaccatgtgaagaacggactggaattcaggtatggctacagacattcgggg
cttaagagcaagatgtccataaccgagataaaaagacttcaggcgcacggtgaggatgcc
attacaccggatatcctaaccagcagggagtacagtgccagaagtgaggtcccaatccca
gcattcatgagtgaggagaggatagtccatggaaatgagataggaaacatttatcacaag
atcatggagcttgcagacttctcagggaaaactgttgcggatgcggagaaggatgtcgac
agagtgtttgagcttgggttatttgatgagctgtacagagagcggataagaccaaagaag
atatataagatgatacacagtgagataggacagcgcatggcggctgcgggcaagtcggac
agactgtaccgtgagagacagttctacatgatgatggagcccggagaaataatgagctca
cttaaggactgcggagacgagacgatagttgtacagggaatcatagatgcctacttcgag
gaggatggcggcatagttcttctggattacaagacagacagcgtaaaggatgcgtcggag
ctggttaagagataccatgtccagctcgacaaatacgccgatgtgcttgaacagctcacc
ggcatgaaggttaaggagaaggtcatatattcattctgtcttgatacaacggtaaacttg
taa
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