Corynebacterium pseudotuberculosis 31: CP31_04580
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Entry
CP31_04580 CDS
T02029
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cop
Corynebacterium pseudotuberculosis 31
Pathway
cop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP31_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cop03021
]
CP31_04580
03019 Messenger RNA biogenesis [BR:
cop03019
]
CP31_04580
Transcription machinery [BR:
cop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CP31_04580
Messenger RNA biogenesis [BR:
cop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP31_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
AFH90663
LinkDB
All DBs
Position
952368..954554
Genome browser
AA seq
728 aa
AA seq
DB search
MTSFTSGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAISG
AQGGKAAQSGHSAAPAAKRNARAQAAPKAEKDSAPVENSVPEVSKEQQEKADQVPAKESK
SRRRRVLKTTGAMDSAHETASSEPISQESSLAEEEKPRRRRVTRRVEVSSEKRDPAENSP
QDKTDTPSESNDGVARVSENGDAEDENRYESRSAARRARRNRARREHREDRQTSQREDNH
AEGDRSSNDEEQRKEASVDNVKTTGRREAPEQQAADQPQTRETREGSENEHPRQRNGRHH
ERGERGDRNRRNRRNRRGRDRDDHRDNSNIEPREDEVLQNIAGILDIVDSNVAFVRTSGY
HAGSADVYVNNQMIRRLGLRAGDAITGQVRMNGDNNHGGHHGHNRGRNRQKYNPLVRVES
VNGMSVEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPK
AGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTA
VAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFL
GAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVN
PSGTRKDELLLVPEEARIMHKLRRILAALENQQAIDLLIKQLKKTKSNGEFLMQIASSAP
MAADAEEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcttttacctctggtaaaggcgatgaaaggacatctgtgacaacaacagataac
ggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgtaagatcgccgctgaa
atgggtctaaaaggcacctctgcattgcgcaaaggtgatcttatcgccgcgattagcggc
gcgcaggggggaaaagctgcacagagcgggcatagtgccgcgcctgcagcaaagcgtaat
gctcgagcacaggctgcccccaaagcagagaaagactctgcacctgtagaaaactcggtt
ccagaagtatctaaggaacaacaagaaaaggctgaccaggttccagctaaggagtccaag
tcgcgtcgccgtcgcgttctaaagaccacaggagccatggattcagctcatgaaacagct
tccagtgagcctatttcacaggaatcctcgctggcagaggaagaaaagccacggcgacgc
cgtgtgactcgtcgcgtagaagtttcttcggagaagcgcgaccctgcagagaattctccg
caggataaaacggatacgcccagcgaatcgaatgatggtgtagcacgagtttccgagaat
ggcgatgcagaggatgagaatcgctatgagtcgcgttcggctgctcgacgtgctcggcgt
aatcgtgctcgtcgggaacaccgtgaagaccgtcagacgtctcagcgcgaggacaatcac
gctgagggtgatcgatcttctaacgatgaggaacagcgcaaagaagcatccgttgataac
gtgaagacaacggggcgtcgagaggcccctgagcagcaggctgcagatcagccgcaaact
cgggaaactcgtgagggctctgaaaacgagcatcctcgtcagcgcaatggccgtcaccat
gagcgtggcgagcgtggggatcgtaaccgtcgtaaccgccgcaatcgtcggggccgtgac
cgcgacgatcatcgggataactccaacattgagccccgtgaagacgaggttttgcagaac
atcgccggcatcctcgacattgtggatagcaatgtcgctttcgtgcggacctcgggctat
catgcaggctctgcagatgtctacgttaacaaccagatgattcgtcgtttgggtttacgt
gctggcgatgccatcaccggacaggttcggatgaacggcgataacaaccatggcggacat
catgggcataatcgtggacgcaaccgccaaaagtacaatccgttggttcgcgttgaatct
gtcaacggcatgtccgtagaagaagctaaggctcgtccggacttttctaagctcactccg
ctgtacccgaaccagagactgcgtttggaaacagagccgaagatccttaccactcgtgtg
atcgacttgatcatgcctatcggcaaaggccagcgtgcgcttatcgtgtctccgccaaaa
gctggtaagactacgattttgcaaaacatcgctaatgccatcgccacgaataatcccgag
tgctatttgatggtggtgcttgtcgacgagcgccctgaagaagtcaccgacatgcagcgc
tccgtcaagggtgaggttattgcctctaccttcgaccgtccgccaagcgagcacactgct
gtagccgagttggcaatcgagcgtgctaaacgactcgtagaacaaggacaagacgttgtg
gtgcttctagattccatcactcgccttggtcgcgcttataacaactcttcgcctgcttca
ggtcgtatcctgtccggtggcgtggattcgaacgctctctatcctccaaagcgcttcctg
ggtgcggctcgtaacatcgaaaatggtggttcgctgaccatcattgctactgcaatggta
gaaactggttctgcaggcgacaccgtgatctttgaggagtttaagggcaccggcaacgca
gagctcaaactggatcgtaagatctccgagcgtcgagtattccccgcagtagacgttaac
ccgtcaggaactcgtaaggacgagctgcttttggttcctgaagaagctcgcatcatgcat
aagttgcgcaggattctcgcagccttggagaaccaacaggccatcgacttacttattaag
cagcttaagaagaccaaatctaatggtgagttcttgatgcagatcgcttcaagtgcaccg
atggctgcagacgccgaggaggagtaa
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