Corynebacterium pseudotuberculosis 31: CP31_06775
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Entry
CP31_06775 CDS
T02029
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cop
Corynebacterium pseudotuberculosis 31
Pathway
cop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP31_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cop03019
]
CP31_06775
Messenger RNA biogenesis [BR:
cop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP31_06775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFH91087
LinkDB
All DBs
Position
complement(1439819..1441870)
Genome browser
AA seq
683 aa
AA seq
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MTEPRNRSRKVTRKAGPPEATETPVFQAPDASAEAPAKAEAEKKTSEESSSNQDVPSKGN
RGRSNSGRSGNGTRNGRSRRGGNSQNNKGNRGRRNVVKSMQGADLTERLPEPPKAPKNGL
RIYALGGISEIGRNMTVFEYNGKMLLVDCGVLFPSSGEPGVDLILPDFGPIEDKLDKVEA
LVVTHGHEDHIGAIPWLLKLRPDLPIYASKFTLALIAAKCREHRQRPKLIEVNEKSDINR
GPFNIRFWAVNHSIPDCLGLAIKTGAGLVIHTGDIKLDQTPTDGRPTDLPALSRFGDEGV
ALMLCDSTNATTPGVSGSEADIAPTLKRLVGDAKQRVILASFASNVYRVQAAVDAAVASG
RKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVMLITTGTQGEPMAALS
RMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQIGATVVTSREAKVHTSGHG
YSGELLFLYNAARPVNAMPVHGEWRHLRANKELAISTGVERDRVVLAQNGVVVDLVDGRA
RVVGQIQIGNLYVDGVTMGDIDAGVLEERTSLGEGGLIAITAVIDNRTGRLLERPTVQAK
GFSEDAVAMMPEVAELVENTMTDLAGEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMPT
VIPTTQTQVEADDEEIRATRESL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccacgtaaccgttcccgaaaggttactcgtaaagctggcccgccggaggct
actgaaacaccagtgtttcaagcccccgatgcatccgcggaagcaccagctaaagctgaa
gcagagaagaaaacttcagaggaaagctcttctaaccaagatgtcccttctaaaggtaat
cgtggacgctccaactctggacgatccggcaacgggacgcgcaatggtcgctcacgccgt
ggcggcaattctcagaacaataaaggcaaccggggtaggcgcaacgtggtcaaatccatg
caaggcgccgatctgactgaacgccttccagagcctcccaaagctccaaagaatggtctg
cgtatctacgctctcggcggtatctccgaaattggtcgtaatatgaccgtttttgagtac
aacggcaaaatgttgttagtcgattgtggcgtgcttttcccctcctccggtgaaccaggc
gtggatttgatcctgcctgattttggtcctatcgaggataagctagacaaagtcgaagcg
cttgttgttacgcatggacatgaagaccacattggagctatcccgtggctgctcaagttg
cgtccagacctgcccatctatgcttccaaatttacgttggctcttattgctgcaaaatgc
cgggagcaccgtcagcgccctaagctgatcgaggtaaacgaaaagtccgacattaaccgt
gggccttttaacattcgtttctgggcggtcaatcactcgattccggattgcttaggcctt
gcgattaaaaccggtgcaggcttggtgattcataccggtgacatcaagcttgatcaaact
ccaacggacggtcgtcctaccgaccttcccgcgctgtctcgcttcggcgatgagggcgtt
gccctcatgctctgcgattccactaatgcaactactccgggtgtctctggctctgaagcc
gatatcgcaccgaccctgaaacgcctcgttggcgatgcgaaacagcgcgtcattttagcg
tcgtttgcctccaacgtatatcgcgttcaggctgcggtagatgctgctgtggcttcggga
cgcaaagtcgcgttcaacgggcgctccatgatccgtaacatggaaattgcggagaaaatg
ggttacctaaaggcgcctcgcggaactattgtcagcatggatgatgctgcaaagatggcg
ccgcataaggttatgctcattaccacgggtacacaaggtgagccgatggcggcactgtcg
cgtatggctcgccgtgagcaccgacagatcacggttcgagatggagatctgatcatcctt
tcgtcttccttagtgcctggtaacgaggaagccgtgtttggcgtcattaatatgctggct
cagattggtgcaaccgttgtgacaagccgagaagctaaggtccacacttctggtcacggt
tattccggtgagctgttgttcctttacaacgctgctcgtccggtgaacgctatgccggta
cacggcgagtggcgtcatctgcgcgccaataaggaactggcaatttcgactggtgtggaa
cgcgaccgtgtggttctcgcacaaaatggtgttgttgtagacctcgttgatggacgtgca
cgggtggtcgggcaaatccagattggcaatctctacgtggatggcgtcactatgggcgat
atcgacgctggggttctggaggagcgaacctccttgggtgagggcggcctgatcgccatc
acagcggtgatcgataatcggactggaaggctgcttgagcgcccgactgttcaggcgaag
ggtttctccgaagatgctgtagccatgatgcctgaggttgcggaactagtagaaaacact
atgactgacttggccggggaaggcgaaaatgatccttaccgcatggttcagcagttgcgt
cgtcgtgtgtcccgctttgtggaacagaagtggcgtcgtaagccaatgattatgcctacc
gttatcccaaccacacagacccaggtggaagcggatgatgaggagatccgagcaacgcgc
gagagcctataa
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