Coprobacter secundus subsp. similis: Cop2CBH44_02850
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Entry
Cop2CBH44_02850 CDS
T06867
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cop2CBH44_02850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
copr03021
]
Cop2CBH44_02850
Transcription machinery [BR:
copr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cop2CBH44_02850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
PF0610-like_N
HTH_10
DUF8427
PhyR_sigma-like
Sigma70_ECF
HTH_5
MEIOC
PCI
INCA1
TEP1_N
Motif
Other DBs
NCBI-ProteinID:
BCI61932
UniProt:
A0A7G1HT56
LinkDB
All DBs
Position
400002..400574
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AA seq
190 aa
AA seq
DB search
MECLDKIDVFSTFDKVYQKYREPFIKLAISYVGDRSIAEDFVTDSFVAYWENRGKLPADT
NIPAYILVSLKNKCLTHLTHLRKRQEVIDNIKNQYQWELDFKITSLEACNPQEIFSKEVH
RLVNDAIRSLPEKTREIFLLSRMESLTNREISERLDISIKTVEFHVSKALKVLRIALKDY
LLVFFYFFVK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcttggataagatagatgtattttcgacttttgataaagtttaccaaaaatat
agagagccgtttatcaaattggcaatttcttatgtcggtgatagaagcatcgcagaagat
tttgtgaccgattcttttgtagcctattgggagaatagggggaaattgccggcagacacc
aatatcccggcttatatattggtatcccttaaaaataagtgcctgacacatttgacccat
ctccgtaaaaggcaagaggtaatcgataatataaagaaccaatatcagtgggaattggac
tttaagattacatcgttggaagcctgtaatccgcaagagatattttcgaaggaggttcac
cgattggtaaatgatgccattcggtcgcttccggaaaagacaagggagatttttctattg
agccgtatggaatctcttacaaaccgggaaatatccgaacgattggatatttccattaaa
acggtcgaattccatgtgagcaaggctttgaaggtacttcgtatcgctctaaaagattat
ttattggtctttttttacttttttgtaaaataa
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