Coprobacter secundus subsp. similis: Cop2CBH44_03610
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Entry
Cop2CBH44_03610 CDS
T06867
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cop2CBH44_03610 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
copr03021
]
Cop2CBH44_03610 (rho)
03019 Messenger RNA biogenesis [BR:
copr03019
]
Cop2CBH44_03610 (rho)
Transcription machinery [BR:
copr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cop2CBH44_03610 (rho)
Messenger RNA biogenesis [BR:
copr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cop2CBH44_03610 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
ATPase_2
AAA
Mor
Spore_III_AA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
BCI62008
UniProt:
A0A7G1HV05
LinkDB
All DBs
Position
518632..520749
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AA seq
705 aa
AA seq
DB search
MYNIVELNDKLLAELKVIAKEMGLKKVDALKKEDLIYKILDQQAIDIAGKKMAAKAEEAA
PKKKKTTRAETKKAPEKEAAVGQPVQDVVKETAAEVVEEAKAKPVKKARSSKSVQKDKTL
EASPVPVADEVQNPAQEQSAVEKKAEPTKVKKTHFAHPALKDQVELQLPLNEEPASADLV
KKEEAPVQEPAVEEKSEPARPVIQKVKKTIIRKVVSEQKPANAQNADQQTASDQSATPAQ
NNDFQPRERRQYDLNIPTPGTSHLQTFFPRSERQRFVPRNQQQRYNNNNNNNNQANTNEQ
SVPVQQPQNNQAQANNQNNNVAVEPKVVEKSYEFEGILTGSGVLEMMPDGYGFLRSSDYN
YLTSPDDIYVSQSQIKLFGLKTGDVVDGPIRPPKEGEKYFPLVKVEKINGRSPEYVRDRV
PFDHLTPLFPEEKFDLTSGRYGNISTRVVDMFSPIGKGQRGLIVAQPKTGKTMLLKDIAN
AISENHPEVFMIILLIDERPEEVTDMARSVKAEVISSTFDEPAERHVKVASIVLEKAKRM
VECGHDVVILLDSITRLARAYNTVSPASGKVLSGGVDANALHKPKRFFGAARNIENGGSL
TIIATALTDTGSKMDDVIFEEFKGTGNMELQLDRKLSNKRIFPAVDITASSTRRDDLLLD
KDTLNRMWILRKYLSDMNSLEAMEFIKDKMEKTSSNQELLLSMND
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtataacattgtggaattaaacgacaagctcttggcagagcttaaggtcattgcaaaa
gaaatgggcttgaaaaaagtcgacgccctgaaaaaagaagacttgatttataaaattttg
gatcagcaagccatagacattgctggcaaaaaaatggcggcaaaagctgaggaggcagct
cctaaaaagaaaaagacaacccgggcagagactaaaaaagctcctgaaaaagaagcggca
gtcgggcaaccggtgcaggacgttgtcaaagaaacggctgctgaagtagtagaagaggca
aaagctaaacctgtaaagaaagctcgcagcagtaagtccgtccaaaaggacaaaaccctc
gaagcctcgccggtacctgtagctgatgaagtacagaatcctgcccaagaacagtcggcg
gtagaaaaaaaagctgagccgacgaaagttaaaaagacacattttgctcatccggcattg
aaagatcaggtggaactgcaattgcctttgaacgaagaacccgcctctgccgaccttgta
aaaaaagaagaagctcccgtacaagaacctgccgtagaagaaaagagtgaacccgctcgc
cctgttatacagaaagtaaagaaaacaattatacgtaaagtcgtttccgaacagaaacct
gcaaatgctcagaacgctgaccagcaaaccgcgtcggaccaatcggcaacaccggctcaa
aataacgatttccaaccgcgtgaacgtagacaatatgacttgaatatcccgactccgggt
acttcacatttgcaaactttcttccccagaagcgaacgccagcgctttgtacctcgcaat
caacaacaacggtacaataataataacaacaataacaaccaggccaatacaaacgaacag
tctgttccggttcaacaacctcaaaacaatcaggcgcaggctaataatcagaacaacaat
gttgccgttgaacctaaagtggtggagaaatcgtacgaattcgaaggaatacttaccgga
agcggagttctcgaaatgatgcccgatggttacggatttttacgttcttccgattacaat
tacctgacatcccctgatgatatatatgtttctcaatcccaaatcaaactctttggtttg
aagaccggagatgttgtagacggccctattagaccgccgaaagaaggagagaaatatttc
ccgttggtaaaagtggagaaaatcaacggacgctcacccgaatatgtacgtgaccgtgtc
ccctttgaccacctgacaccattgttccccgaagaaaagttcgatttgacttcaggccgt
tatggaaacatttctacccgtgtagtagatatgttctctcccataggtaaaggtcagcgg
ggacttatcgtagcacaacccaaaaccggtaaaacgatgttgttgaaagacatcgcgaat
gctatttcggaaaatcatcccgaagttttcatgataatactgcttatcgacgaacgaccc
gaggaggtgaccgatatggcacggagtgtgaaagccgaggttatatcttctactttcgat
gagccggccgaacggcacgtaaaagtagccagcatcgttctcgaaaaagcaaaacgtatg
gttgagtgcgggcacgatgtcgtgatattgttagattccatcacacgtttggctcgagct
tataatacagtttctccggcatcgggtaaggtcttgtcgggaggtgtcgatgccaatgca
ttgcacaagcccaaacgttttttcggtgcagcacgtaatatcgagaacggaggtagcttg
actattattgcaacagcccttaccgatacaggctctaagatggacgatgtgatttttgaa
gagttcaaaggtaccggcaatatggagttgcagttagaccgtaaattgtccaataagcgt
attttcccggcagtagatattacagcctccagtactcgtcgtgacgatttgttgctcgac
aaagacacattgaataggatgtggatattacgcaaatacctctcggatatgaattctttg
gaagcgatggaatttattaaagacaagatggaaaagacctcatcgaaccaagaattgctg
ttgtctatgaacgactaa
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