Coprobacter secundus subsp. similis: Cop2CBH44_05420
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Entry
Cop2CBH44_05420 CDS
T06867
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr00300
Lysine biosynthesis
copr00470
D-Amino acid metabolism
copr01100
Metabolic pathways
copr01110
Biosynthesis of secondary metabolites
copr01120
Microbial metabolism in diverse environments
copr01230
Biosynthesis of amino acids
Module
copr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Cop2CBH44_05420 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cop2CBH44_05420 (dapF)
Enzymes [BR:
copr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Cop2CBH44_05420 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BCI62189
UniProt:
A0A7G1HR71
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Position
741247..742086
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AA seq
279 aa
AA seq
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MRFTKMQGAGNDYIYVNGFQENIKNPERLAIELSDRHFGVGSDGLVIILPSKRCDFKMRM
FNPDGSEAEMCGNASRCIGKYVYDKGLTDKKEITLETKAGIKKLKFTVTKNKVKNVCVDM
GEPIISPSLIPVSKIGDSIIGEPFSVGDEQYKITCISMGNPHTVIFLESFDNIDLHQTGY
SIEHHPLFPQRTNVEFAIIESKNNIRMRVWERGTGETLACGTGACATLVAAVLNGFAERK
AVLHLLGGDLLIEWNDLDNHIYMTGDAITVFEGETVDRF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagattcactaaaatgcagggtgctggtaacgattatatatatgtaaacggatttcaa
gaaaatataaaaaatcctgaaaggttggccatagaattgagtgacaggcattttggtgtc
ggatcagatggattggttattattttgccgtcgaaaaggtgtgatttcaaaatgagaatg
ttcaatccagatggctcggaagcggagatgtgtggtaatgcatccagatgcatcggaaaa
tatgtatatgataaagggttaactgataaaaaggaaattactcttgaaactaaagccgga
ataaaaaagctgaaatttacagttacaaaaaataaagtaaaaaacgtgtgtgttgatatg
ggagaacctattatttctccttctctaattcccgtatcgaaaataggtgattccatcatc
ggagaaccattttctgtcggggatgaacaatataagataacttgcatatctatgggaaat
cctcataccgttatctttttggaaagttttgataatatagatttacatcagacaggttat
tctatcgaacatcatcctctgttccctcaacgaacaaatgttgaatttgcaataatagaa
tcaaaaaacaatatacggatgagagtgtgggaaagagggacaggagaaactcttgcttgc
ggaacaggagcctgtgctacgttagtagctgcggtactgaatggatttgcagaaaggaag
gctgtgcttcatttattaggaggtgacttgctaatagaatggaatgatttggataatcat
atctatatgacgggagatgcaattaccgtttttgaaggggagacagtcgatcgattttaa
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