Coprobacter secundus subsp. similis: Cop2CBH44_10040
Help
Entry
Cop2CBH44_10040 CDS
T06867
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
copr
Coprobacter secundus subsp. similis
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
copr03009
]
Cop2CBH44_10040
Enzymes [BR:
copr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Cop2CBH44_10040
Ribosome biogenesis [BR:
copr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cop2CBH44_10040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
Methyltransf_25
Methyltransf_15
N6_N4_Mtase
PCMT
Methyltransf_2
Methyltransf_11
PrmA
Methyltransf_37
UPF0020
Motif
Other DBs
NCBI-ProteinID:
BCI62651
UniProt:
A0A7G1HVU3
LinkDB
All DBs
Position
complement(1285543..1286952)
Genome browser
AA seq
469 aa
AA seq
DB search
MARKKKELPVIEQVEIVDVAAEGKAIARVNDLVVFVPFVAPGDIVDLQLHRRKHKYAEGR
VLKIHKYSDVRTEPFCSHFGICGGCKWQHLPYEQQLFYKQKQVEDNLIRIGKISLPEISP
IKGSSKIQFYRNKLEFTFSNKSWLTQEELNSEQTFDCRNALGFHIPGMFDKVLDIKKCWL
QDDISNLIRLEIRKYTIEHNYPFFDLREQSGLMRNIIVRTASTGEIMLIVVFFRKDTEKI
QALMSHIAEVFPQITSLLYVINQKANDTITDQKVHVFRGRDYIIESMEDLQFKIGPKSFY
QTNSEQAYELYKIVRDFAGLNGTELVYDLYTGTGTIANFIASQAHKVIGIEYVPEAIEDA
KVNSALNGIENILFYAGDMKDILTQDFINEHGRPDVIITDPPRAGMHDDVIKTILFAEPG
KIVYVSCNPATQARDLGLLDEKYKVTRVQPVDMFPHTHHVENVVLLKKK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgaaaaaagaaagagctacctgtaatagagcaagttgaaattgttgatgttgct
gctgaaggtaaagctattgctcgggtaaatgatttagttgtatttgtaccatttgttgca
ccaggagacattgtagatttgcaattgcatcgtagaaagcataaatatgctgaaggtcgg
gtgttgaaaattcataagtattcggatgtacgtaccgaacctttttgtagtcattttggt
atttgtggcgggtgtaaatggcagcatcttccttatgagcagcaattgttttacaagcag
aagcaggtagaggacaatctaattcgtataggaaaaatttctttgccagagatatctcct
ataaaaggttcttcgaaaatccaattttatcgtaataagttggaattcactttttcgaat
aaatcttggttgacgcaagaagaattaaattctgaacaaacatttgactgtcgtaatgca
ttgggtttccatataccgggaatgtttgacaaggttctggatataaagaaatgttggtta
caagacgatatttctaatttgatacgtttggagattcgaaaatatacaattgaacataat
tacccttttttcgatttgagagaacaatcggggctgatgcgtaatattattgttcgtaca
gcgtctacgggtgagattatgttgattgtggtctttttcaggaaagatacagagaagata
caagcccttatgagtcatattgcggaagtgtttcctcaaataacgtctttgttgtatgtt
ataaatcagaaggcaaatgatactattaccgaccagaaagtgcatgtgtttcggggacgg
gattatattatagagtcgatggaagatttgcagtttaaaatagggccgaaatcattctac
cagacgaattcagaacaagcttatgagttgtataagatagtccgagattttgctgggttg
aatgggactgaattggtgtatgatttgtatacgggaactggaactatagccaattttatt
gcttcgcaagcacataaggtaataggcatagagtatgttcctgaagcgatagaagatgct
aaagtaaattctgcgttgaatggaatcgagaatatacttttttatgcaggagatatgaag
gatatccttactcaagattttattaatgaacatggacgtcctgatgtaattattactgac
ccacctcgtgcaggaatgcatgatgatgtgataaaaactattttatttgctgagccgggg
aagattgtctatgttagttgtaatccggctacgcaggctcgagatttgggattactggat
gaaaaatataaagtgacacgagtgcaaccggttgatatgtttccacatacacatcatgta
gaaaatgtagtattattaaagaaaaagtag
DBGET
integrated database retrieval system
