Coprobacter secundus subsp. similis: Cop2CBH44_12330
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Entry
Cop2CBH44_12330 CDS
T06867
Name
(GenBank) RNA-binding protein
KO
K06959
protein Tex
Organism
copr
Coprobacter secundus subsp. similis
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Cop2CBH44_12330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
Spt6_S1
HHH_6
DUF2855
HHH_5
ATS
Motif
Other DBs
NCBI-ProteinID:
BCI62880
UniProt:
A0A7G1HTL9
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All DBs
Position
complement(1532514..1534640)
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AA seq
708 aa
AA seq
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MNILFNKIVSSTLNISERQVENTIRLLDEGATIPFISRYRKEVTGALDEVQISNVKEQYD
KLRELEKRKQTIITTIGEQGKLTPDLRTRLENSWNAMEIEDIYLPYRPKRRTRAEVAREK
GLEPLAKILMIQTENNLDIKAQAFVKNDVVDTEEALKGARDIIAEWISENERARNMVRSI
FRKEAIISSRVVKGKEEEAAKYRDYFDWSEPLRRCSSHRLLAVRRGESEGFLKVSIEPDS
ELCIERLEGLFVKNATASAAQVNEAVRDGYKRLLKPSIETEFAALSKERADDEAIRVFTE
NLRQLLLAAPLGQKRVMGIDPGYRTGCKLVCLDEQGDLLHNETIYPHPPKQDVVGASRKV
TKLVEAYNIQAIAIGNGTASRETERFIANLRYDRKLQVFIVSENGASIYSASKVAREEFP
NYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQMKLKRALDQTVENCVNQV
GVNVNTASKHLLTYVSGLGPQLAQNIVDYRQKNGAFTQRKQLMKVPRMGEKAFEQSAGFL
RIPGAENPLDNSAVHPESYAIVERMAKDLNCTVRELIENKDLKKKLHLEDYISGTVGMLT
INDIISELDKPGRDPRQTVKVFEFDPTVRTIEDLKEGQVLPGIVTNITNFGCFVDIGIKE
NGLVHISQLANKYISDPTEIISLHQHVTVKVIGIDLERKRVQLSMKDI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatatactatttaataaaattgtttcttcgactttaaatatctccgagagacaagtt
gaaaatacaattcgacttcttgatgagggggcgactattccctttatcagtcgataccgt
aaggaggtaacaggagctcttgatgaggttcagattagtaatgttaaagagcagtatgac
aaattacgagaacttgaaaaaagaaagcagactataattactacgattggtgagcaaggt
aaattaactcctgatttacgaactcgtctcgaaaattcttggaatgcgatggagattgaa
gatatctatttgccgtatagacctaaaagacgtactcgtgctgaggtagctcgtgaaaag
gggctagaacctttggcaaaaattttgatgatacagaccgagaataatttagatataaag
gctcaagcttttgttaaaaatgatgttgttgatacggaagaagcgttgaaaggtgctcga
gatataatagctgaatggataagcgagaatgaacgtgctcgtaacatggttcgctctatt
ttcagaaaagaagctattatatcttctcgtgtagtgaaaggtaaagaggaagaggctgct
aagtaccgtgattattttgattggagtgaacctttgcgccgatgttcctcccataggctg
ttggctgtcaggaggggtgaatctgaagggtttctgaaagtttctatcgaaccggatagc
gaactttgtattgagcggcttgaaggcctgttcgtaaagaatgcaacagcatccgcagca
caagtgaacgaggcagttcgtgatggatataagcgtttgcttaagccttcgatagaaacg
gagtttgccgcattgtcgaaggagcgggcagatgatgaggctatacgggtatttaccgaa
aatcttcgacaattattgttggctgctccgttggggcaaaagagagttatgggtatcgat
cccggatacagaaccggatgtaaattagtctgccttgatgagcaaggggatcttttacac
aatgagacaatttacccacatcctcctaaacaggatgtggtaggagcttctcgaaaagtt
actaaattggttgaggcttataatatacaagctattgccattgggaatggtacagccagt
cgagagacggaacgatttatagctaatctgcgatatgaccgtaaattacaggtatttatc
gttagtgaaaatggagcatctatttattcggcgtcaaaagttgctcgagaagaatttcct
aattatgatgttaccgttaggggggcagtttctatcggccgtcgcttaatggatccactt
gctgaattggtgaaaattgatcctaagtctataggggtggggcagtatcagcacgacgtt
gaccagatgaaattgaaaagagcacttgatcagacagtagaaaattgtgtcaatcaggtg
ggagtaaatgtaaatacagctagtaagcatttacttacttatgtttccggattaggacca
cagttggctcagaatattgttgattatcgtcagaagaacggggcatttactcagagaaaa
caattgatgaaagtacctcgtatgggagaaaaagctttcgaacaatcggcaggttttttg
cgtataccgggagcggaaaaccctttggataattcagcggtgcatccggaaagttatgct
attgtagaacgtatggcaaaagatttgaattgtactgtacgagaattgatagagaataag
gatttgaagaaaaagcttcatcttgaagattatatatctggtacggtagggatgcttacc
ataaatgatattataagtgagcttgataagccggggagagatccgcggcaaacagtaaag
gtgtttgaattcgatccgacagtaagaacaattgaggatttaaaggaaggacaggtattg
ccaggtatagtaacgaatattactaattttggatgtttcgtagatataggtatcaaagaa
aatgggttggtgcatatctctcaactagccaataaatatatttctgatcccacggaaata
atttctttgcaccagcatgtgacagtcaaagtaattggtatagatttagaaagaaagaga
gtgcaattgtcgatgaaagatatataa
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