Coprobacter secundus subsp. similis: Cop2CBH44_13710
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Entry
Cop2CBH44_13710 CDS
T06867
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cop2CBH44_13710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
copr03021
]
Cop2CBH44_13710
Transcription machinery [BR:
copr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cop2CBH44_13710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_10
HTH_24
UPF0122
LexA_DNA_bind
HTH_40
Sigma70_ECF
HTH_38
PF0610-like_N
HTH_23
HTH_11
Mesd
DUF6362
HTH_17
HTH_20
DUF2774
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BCI63018
UniProt:
A0A7G1HXR1
LinkDB
All DBs
Position
1722529..1723131
Genome browser
AA seq
200 aa
AA seq
DB search
MTNSNNSSEKERELVLKLIQGNEDAFCELYSSYKHRLIYFAMKFLKSSEFAEDIFQDTFT
TIWQTRKFINPDIPFSSFLYTIMRNRILNLLRNLDNETELKNYIFDQAIDAHEDIEEHLF
SKEFMKYLTCAMEKLTPRQREIFDMSRNQDMSHKEIAQKLGISLNTVQEHISIALKTIRT
YLDKHAGPYVNIVIFLFLLK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcgaataattcatcagagaaagaaagagaacttgtattaaaactaattcaa
ggtaatgaagatgctttttgcgaattatattcctcttataagcatcgtctcatctacttc
gcgatgaaatttctcaaatcatccgaatttgcagaagacatctttcaagatacattcaca
accatttggcaaacacgaaaattcatcaatccagatattcctttttcatcttttctatat
actataatgcgaaaccgtatcttgaatttattgcgtaatttagacaatgaaacagaactg
aaaaactacatcttcgaccaagctatagacgcccacgaagatatcgaagaacacttattt
tcaaaagaatttatgaaatatcttacttgtgctatggaaaaactgacaccacgccaacga
gaaatttttgacatgagtagaaatcaagatatgtctcataaagaaattgctcaaaaatta
ggtatctcgctcaacaccgtacaagaacatatttcaattgcattaaaaactatcagaacc
tatttagataaacacgcagggccttatgtcaatattgtaatcttcttatttttattgaaa
taa
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