Coprobacter secundus subsp. similis: Cop2CBH44_16190
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Entry
Cop2CBH44_16190 CDS
T06867
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cop2CBH44_16190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
copr03021
]
Cop2CBH44_16190
Transcription machinery [BR:
copr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cop2CBH44_16190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_40
HTH_10
GerE
Sigma70_r2
HTH_24
TnsD
HTH_23
HTH_20
HTH_30
DUF134
Motif
Other DBs
NCBI-ProteinID:
BCI63266
UniProt:
A0A7G1HUB5
LinkDB
All DBs
Position
2029033..2029728
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AA seq
231 aa
AA seq
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MHNYLHIKTYISNIKIQQIIDILLNLITTSMLEEINTSNLIYYLRKGDERAIRFLFETYY
IELCLLAKGILNDDFSAQCIVSDLIYHLWENRDSLKKDIELHSYMYKAVKNNCINQLNKN
YIKQEYSISGLINNNVTPSDIYFICKDTPYTELENKEILVKIRQAIDSLPQECRTIFELN
RYDGLKYEEIAQKQGISINTVKYHLKQAIKKIREQLTDYLTCLLILFNIQC
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaattatttacatataaaaacatatataagtaacataaaaattcaacagattata
gatatacttcttaaccttataacaacttccatgcttgaagaaataaacacatcaaatctt
atatactatttacgaaaaggcgatgaaagagccattcgatttctattcgaaacttattat
atcgaattatgcttattagctaaaggaattcttaatgatgatttttctgctcaatgtata
gtttccgatttaatataccatctatgggaaaacagagattctctaaagaaagatattgaa
ctacactcatacatgtataaagctgtaaaaaataattgtatcaatcaactaaataaaaat
tatataaaacaagaatattctatctctggtttaatcaataataatgtaacaccttcagat
atatatttcatatgtaaagatactccttatacagaattagaaaacaaagaaattcttgta
aaaataagacaagctatagactctttaccccaagaatgccgtacaatatttgaattaaac
cgctacgacggactaaaatatgaagagattgcgcaaaaacaaggtatttctatcaacacc
gttaaatatcatttaaaacaagcaataaaaaaaatacgggaacaattaactgattatcta
acatgtttattaatactattcaacatacaatgttaa
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