KEGG   Coprobacter secundus subsp. similis: Cop2CBH44_16290
Entry
Cop2CBH44_16290   CDS       T06867                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
copr  Coprobacter secundus subsp. similis
Pathway
copr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:copr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Cop2CBH44_16290 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:copr03019]
    Cop2CBH44_16290 (rny)
Messenger RNA biogenesis [BR:copr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Cop2CBH44_16290 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 Fucose_iso_C Fez1 DUF4527 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: BCI63276
UniProt: A0A7G1HUC3
LinkDB
Position
complement(2039130..2040671)
AA seq 513 aa
MEYILLIGIGIGCLLLGGGLVYVIYKTLLKSRVKSIIEEADKEAEVIKKNKMLEVKEKFL
HLKADMEKQANARNAKLQSAEAKAKQRELQLNQQQQELQRKKAEADAIRSNLDAQLEVIE
KKKQELERLHKTEVEKLEHLSGLSADEAKEKLIESLKEEAKTEAASYINDIMDEAKLTAN
KEAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIIVD
DTPEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVTKVRKQIEEEIIETGKRTA
IDLGIHGLHPELIRLVGKMKYRSSYGQNLLQHSRETANLCAVMASELGLNPKKAKRAGLL
HDIGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDEVEMSSLIAPLVQVCDAIS
GARPGARREIVEAYIKRLNDLEQLALSYPGVLKTYAIQAGRELRVIVGADKIDDAETENL
STEIAKRIQDEMTYPGQVKITVIRETRAVSFAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggaatacatactattaattgggatcggtattggttgtttgttgttaggtggcggtttg
gtttacgttatctacaaaaccttactgaaatccagggtaaaatcaattattgaggaggcc
gataaagaggctgaagttataaagaaaaataagatgcttgaagtgaaagaaaaatttctt
cacttgaaggctgatatggaaaaacaagctaatgctcgtaatgctaaattgcagtcggct
gaagctaaagcaaaacaacgagaattgcagttaaatcaacagcagcaggaattacagcgt
aaaaaagctgaggctgatgctatacgatcaaatttggatgcccaacttgaggtaattgaa
aagaagaaacaggagttggaacggttgcataaaacagaggttgagaaattagagcattta
tcgggtctttctgctgacgaggcgaaagaaaaattaatagaatcattgaaagaagaagca
aagactgaagctgcatcttatattaatgatataatggatgaagccaagttgacagctaat
aaggaagctaaacggattgttattcagagtatacagcgagttgctacagaaacggcgata
gaaaattcagtaacagtgttccatattgaatcggatgaaataaaagggcgtattataggt
cgtgaagggcgtaatatccgggctcttgaagcggctactggtgttgagataattgtagat
gacactccggaggctattgtcctttcagcttttgatcctgttcggcgcgagattgcccgt
ttggcgttgcatcagttagttaccgatggacgtatccatcctgcacgtatcgaagaagtt
gttacaaaagttaggaaacaaattgaggaagaaattatagagacgggaaaacgtacagca
atagatttaggaattcatggcctgcatcctgaattgattcgcttagtaggtaagatgaaa
taccgttcttcttatggacagaatttattgcaacattctcgggagacagctaatttatgt
gcagttatggcgagcgaacttggtttgaatcctaaaaaagcgaagcgtgctggattatta
catgatataggaaaagtccctgatgaggagccggagttgccacatgctttattaggaatg
aaattagctgaaaaatacaaagagaaacctgacatttgtaatgctattggagctcatcat
gatgaagtggaaatgagtagtcttattgctcctttagtgcaagtgtgtgatgctatatcg
ggtgcaagacctggtgctcgccgagagattgttgaagcttatataaagagattaaatgac
cttgaacaattggcgctttcatacccaggagtattgaaaacatatgcaatacaggctggc
cgagaattaagggtaattgtgggggctgataaaattgatgatgcagagactgaaaacctg
tcaacggaaatagctaaacggattcaagatgaaatgacttatcctggtcaggttaagatt
accgttatacgggaaacccgtgcagtaagctttgcaaaataa

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