Coprobacter secundus subsp. similis: Cop2CBH44_20610
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Entry
Cop2CBH44_20610 CDS
T06867
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03030
DNA replication
copr03430
Mismatch repair
copr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cop2CBH44_20610
03430 Mismatch repair
Cop2CBH44_20610
03440 Homologous recombination
Cop2CBH44_20610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
copr03032
]
Cop2CBH44_20610
03400 DNA repair and recombination proteins [BR:
copr03400
]
Cop2CBH44_20610
Enzymes [BR:
copr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cop2CBH44_20610
DNA replication proteins [BR:
copr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cop2CBH44_20610
DNA repair and recombination proteins [BR:
copr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cop2CBH44_20610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
BCI63708
UniProt:
A0A7G1HZU1
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All DBs
Position
2555973..2559800
Genome browser
AA seq
1275 aa
AA seq
DB search
MHPFVHLHVHSQYSILDGQASIQALVDKAMHDGMRGIAITDHGNMFGIKEFYNYVNKKNG
PITNEIKDLKKKITAIEKGEIECENKETEIASLKKQIEETKKKLFKPIIGCEMYVARKRL
QDKNGKPDQSGYHLVVLAKNEKGYHNLIKLVSKAWTEGFYMRPRTDRVELEKYHEGLIVS
SACLGGEVPKKINKGLIDEAEEAIRWYKNIFGEDYYLELQRHKATVERANHEAYPLQVTA
NAKILELAKKYNIKVICTNDVHFVDEENAEAHDRLICLSTGKDLDDPNRMLYSKQEWMKT
TAEMNEVFADVPEALINTQEICDKVEFYSIDHPPIMPTFAIPEEFGTEEAYRKKYTEEDL
FNEFTQDENGNVVLSESAAHAKIKTLGGYDKLYRIKLEADYLKKLTFDGAQKRYGEPLDP
EIQERLIFELHIMKTMGFPGYFLIVQDFIAAARNMGVSVGPGRGSAAGSAVAYCLGITQI
DPIQYDLLFERFLNPDRISLPDIDIDFDDDGRGEVLRWVTEKYGHEKVAHIITYGTMATK
MVIKDVARVQKLPLSESDRLTKLIPDRLPEVNGKSPKINLKNCIAAVPELQRACDSSNEL
VHDTMKYAQMLEGNVRGTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVI
EDTGLIKMDFLGLKTLSIIKEAISNIKLHTGKDLDIDSISINDVATYKLYSEGKTVGTFQ
FESAGMQKYLRELQPTTFEDLIAMNALYRPGPMDYIPQFIDRKHGREPIEYDIPVMEKYL
KDTYGITVYQEQVMLLSRLLANFTRGESDALRKAMGKKLKDKLDALKPKFIAGGQKNGHD
PKTLEKIWADWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAAVMSRNISNITEI
TKLMDECKAMGILVLGPDINESNLKFTVNKDGNIRFGLGAIKGVGEAAVNAIMEERNKNG
AFTGIFNFVQRVNLNACNKKNIENLALSGGLDSFPELKREQYFAENSKGETFLETLVRYG
NKYQVDKATQTNSLFGGSEAIDIAKPDIPTTEPWTDLERLEKERDLVGIYLSAHPLDDYA
LALEYGCNTKMVDLADKSALLNKEIIMGGIVIGFREGVTKKGKPFGIMKIEDYSGSAEIP
LFGNDFVDYRNYGYNGMYLLIRGQYQPRKYNENEYDFRISSISQLPDVKDQLLRNITISI
PIRALHKGNIEPLADLLPNEKEAQTQLFFELIDEETNNVVKLFARNSTINITKELINFLN
ENNDFSFKINAQITN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatttgtccatttacacgtgcattcccaatactcaatcctcgatggtcaggct
agcatacaagccttggtagataaagctatgcatgacggtatgagaggtattgccattacc
gaccacggaaatatgttcggtataaaagagttttataattatgtcaacaaaaaaaatggt
cctataacaaatgaaattaaagacctgaaaaagaaaataactgcaatcgaaaaaggcgaa
atcgaatgtgaaaataaagaaacagaaattgcaagtctcaaaaaacaaatcgaggaaact
aaaaaaaaactatttaaaccaatcattggttgcgaaatgtatgtggccaggaaacgattg
caagataaaaacgggaaaccagaccaaagcggttatcatttagttgtcttggcaaaaaat
gaaaaaggatatcataatctaataaaactagtttcaaaagcatggactgaaggattttat
atgcgtcctcgtactgacagagtagaactcgaaaagtaccatgaaggacttattgtatca
tccgcttgtcttggaggagaagtaccaaaaaaaataaataaaggactcattgatgaagct
gaagaagccataagatggtacaaaaatatttttggtgaagactattatcttgaactacaa
cggcataaagcaaccgtcgaaagggctaatcacgaagcataccctttacaagttactgcc
aatgcaaaaatacttgaattagcaaaaaaatataatattaaagttatatgcacaaatgac
gtgcatttcgttgatgaagaaaatgcagaagctcatgatcgtctaatctgtttaagtact
ggaaaagacttagatgatcctaaccgtatgctctactctaaacaagaatggatgaaaacc
acggctgagatgaatgaagtcttcgctgacgttcctgaagcactaattaatactcaagaa
atatgtgataaagtagaattttattctatcgatcatcctcccatcatgccaacatttgcc
atccctgaggaatttgggacagaagaagcatatagaaaaaaatatactgaagaagatctc
tttaatgaatttacacaagatgagaatgggaatgtcgtattaagcgaatctgcagcccac
gctaaaatcaaaactttaggaggatacgataaattgtaccgcataaaactcgaagctgat
tatttgaaaaaactaactttcgatggtgcacaaaaaagatatggagaacctctagaccca
gaaatccaggaacgcctaatatttgagctacatatcatgaagactatgggatttccaggc
tactttctgattgttcaagattttattgccgctgcccgtaatatgggggtatctgtaggt
cctggtcgtggttcagctgcaggttcggctgtagcatattgcttaggaataacccaaata
gaccctatccaatatgatttgctgtttgagcgttttcttaatccagatcgtatttcatta
ccagatattgatatagatttcgacgatgatggtcgtggagaagttttaagatgggttact
gaaaaatatggacacgaaaaagtcgcccatattattacatacggaaccatggctaccaaa
atggttattaaagatgtagctcgagtacagaaattacctctttcagaaagtgaccgatta
accaagttaataccagaccgattgccagaagtaaatggcaaatcccccaaaataaatcta
aaaaattgtatcgctgcagttcctgaattgcaaagagcttgtgactcgtccaatgagtta
gtacacgatacaatgaaatatgcccaaatgttagaaggaaatgttagaggaacgggagta
catgcttgtggaactatcatttgccgagatgatataactgattgggttccggtaagtaca
gcagacgataaagaaactggagaaaaaatgctggtaactcagtatgaaggttctgttatt
gaagatactggcctcataaaaatggactttcttggacttaaaactctctctatcataaaa
gaagcaatcagtaatataaagttacataccggaaaagatttggacatagactccatatcc
atcaatgacgttgcaacttataaattatatagtgaaggaaaaactgtcggaacattccaa
tttgaatcggcaggtatgcaaaaatatcttcgtgaattacaacccacaacattcgaagat
cttattgccatgaatgccctctatcgtccaggtcctatggattatatacctcaatttatc
gaccggaaacatggaagagagcctatcgaatacgatattccggtaatggaaaaatactta
aaagatacatatggaattactgtatatcaagaacaggtgatgttattatcacgtttatta
gccaattttacccgaggagaatcagacgctctccgtaaagctatggggaaaaaattgaaa
gataagttggatgctttaaaacccaagttcattgctggagggcagaaaaatggacatgac
cccaaaactcttgagaaaatttgggccgattgggaaaaatttgcctcatatgcatttaat
aagtctcatgcaacatgttattcctgggtagcctatcaaactgcgtatttaaaggcgaac
tacccttccgaatatatggctgctgtcatgagccgtaacatctcaaatatcactgaaatt
accaaactcatggatgaatgcaaagccatgggtatattagtattaggccctgatataaat
gaaagtaacttgaaatttacggtcaataaagatgggaatattcgttttggtctcggtgca
ataaaaggtgtaggggaagctgctgttaatgccattatggaggaacgtaataaaaacgga
gcatttacaggaatctttaattttgtacaacgagtcaatttaaatgcctgtaataaaaaa
aatatagaaaacttggctttgtccggaggtttagatagtttcccagaactaaaacgggag
caatattttgcagaaaatagtaaaggagaaactttccttgaaacattagtccgttatgga
aataaatatcaggtagataaagcgactcagaccaactctttatttggtggtagtgaagca
atcgatattgccaaacctgatattccgaccacagaaccatggaccgatttggaacgctta
gagaaagaacgtgatttagtagggatttatttgtcagcccatcctcttgatgattatgca
ttagcccttgaatatggttgtaatacaaaaatggttgatttagcagacaaatcagccctt
ctaaacaaagaaataataatgggaggtattgtaattggatttagggaaggtgttactaaa
aagggtaagcctttcggcataatgaaaatagaagattactctggctctgcagaaattcct
ttattcggaaacgactttgtcgattataggaattatgggtataatggtatgtaccttctc
atccgaggacaatatcaacctcgtaaatataatgagaatgaatatgacttccgtattagt
tctattagccaattacctgatgttaaagaccaattgttgagaaacatcactataagtatt
ccaatacgagcattacacaaaggaaatattgaacctctggcagatttacttccaaatgaa
aaagaagcacagacacagcttttctttgaactaattgacgaagaaaccaacaatgttgta
aaactttttgcccgtaattcaacaattaatattactaaagaactaattaactttttaaat
gaaaataatgacttttcatttaaaataaatgcacaaataacaaattga
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