Coprobacter secundus subsp. similis: Cop2CBH44_20790
Help
Entry
Cop2CBH44_20790 CDS
T06867
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cop2CBH44_20790 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
copr03021
]
Cop2CBH44_20790 (rpoA)
03400 DNA repair and recombination proteins [BR:
copr03400
]
Cop2CBH44_20790 (rpoA)
Enzymes [BR:
copr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cop2CBH44_20790 (rpoA)
Transcription machinery [BR:
copr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cop2CBH44_20790 (rpoA)
DNA repair and recombination proteins [BR:
copr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cop2CBH44_20790 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCI63726
UniProt:
A0A7G1HVJ3
LinkDB
All DBs
Position
complement(2581984..2582976)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADAFFGKFEFRPLEPGYGVTVGNALRRILLSSLEGFAITSIRID
GVEHEFSTVPGVIEDVTNMILNLKKVRFKQIVEEIENEKVTITVSGSEVFKAGDIGKYLT
GFEVLNPDQVICHMDSSASFQIDITINKGRGYIPADENRNPNDEVNVIPIDSIFTPIRNV
KYAVENFRVEQKTDYEKLVLEITTDGSIHPKDALKEAAKILIYHFMLFSDEKITLETTDV
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKSADVETLGELVVFNKTDLLKFRNFG
KKSLTELDELLANLNLSFGMDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacccgataaagtattaatgttggaggcggacgcattc
ttcggtaaatttgaattccgtccgttagagcccggttatggtgttactgttggtaatgct
ttacgccgtattctcctttcttcgcttgaaggctttgctatcacatcgattcggatcgat
ggcgttgaacatgagttttcaacagtccccggtgttatcgaggatgtgacaaatatgatt
ctgaatttgaaaaaagttcgtttcaaacaaattgttgaagaaatcgagaatgagaaagta
acgattactgtttcgggttcggaagtgttcaaggctggagacattggcaaatatttaaca
gggtttgaagtattgaatcctgaccaagttatttgccatatggattcaagtgcaagtttt
cagatagatattacaattaacaaaggtcgtggttacattccggcagatgagaatcggaat
ccgaacgatgaagtgaatgtaattcctatcgactcaatcttcactccgattcggaatgtg
aaatatgctgttgaaaacttccgcgtagaacaaaaaacagactacgagaaactggtatta
gaaattacgaccgatggatcaatccatccgaaggatgcattaaaagaggctgctaaaatc
cttatttatcactttatgttgttttctgacgaaaaaattactttggaaacaacagatgtt
gacggtaacgaagaattcgacgaggaagtattacatatgcgtcagttacttaaaactaaa
cttgttgatatggatttatcagttcgggctcttaattgcctaaagtcggctgatgtagag
acgttgggagagttggttgtcttcaataagacagatctcttgaagtttagaaattttggt
aaaaaatctttgactgaattagatgaacttttggccaatttgaatctttcattcggaatg
gatatctcgaagtataaattagataaagagtaa
DBGET
integrated database retrieval system
