Coprobacter secundus subsp. similis: Cop2CBH44_21580
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Entry
Cop2CBH44_21580 CDS
T06867
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cop2CBH44_21580 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
copr03019
]
Cop2CBH44_21580 (pnp)
03016 Transfer RNA biogenesis [BR:
copr03016
]
Cop2CBH44_21580 (pnp)
Enzymes [BR:
copr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cop2CBH44_21580 (pnp)
Messenger RNA biogenesis [BR:
copr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cop2CBH44_21580 (pnp)
Transfer RNA biogenesis [BR:
copr03016
]
Prokaryotic type
tRNA degradation factors
Cop2CBH44_21580 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
BCI63805
UniProt:
A0A7G1HVL7
LinkDB
All DBs
Position
complement(2668371..2670572)
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AA seq
733 aa
AA seq
DB search
MINPIKKTIELSDGRTITIETGKLAKQADGAVEVRMGNTMLLATVVSAQEAGEGVDFMPL
QVEYKEKFSAFGRFPGGFTKREGRASDYEILTSRLVDRVLRPLFPDNYHADTFVNIILFS
SDGKDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFKINPTFEELAKADIDLMV
GATIDNIMMVEGEMDEVSEAELLEALKFAHEAIKVQCQVQIELAEAVGSTVKRTYCHEVN
DEELRKDVWEKCYDKAYEIARSGNTNKHERMAAFDGIVEDYLAAMDPEAAAEKEALVKRY
YHDVEKEAMRRCILDEGKRLDGRTTTQIRPIWAEVDYIPGPHGSAVFTRGETQSLSTVTL
GTKLDEKIVDDVLDQSRERFLLHYNFPPFSTGEAKASRGVGRREIGHGNLANRALKRMIP
EDYPYVIRVVSDILESNGSSSMATVCAGTLALMDAGVQIKKPVSGIAMGLITDKGNAKFA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEVLEKALAQAREGRMHILGK
ILETIPEPRAEMKPHAPRIEVINIPKDMIGAVIGPGGKIIQGIQEATGAVVTIEEIDNIG
RVEVSAPGRDAINAAMAKIKGIVAIPEEGEVYTGKVKSILAFGAFVEFMPGKDGLLHISE
ISWDRIDSMENSGIKEGDDVTVKLIEIDKKTGKFRLSMKALQPRPERAERTERPEKVERR
NKPFNKPKKEDKE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcctattaaaaaaacgatcgaattgagcgatggacggaccatcacgatcgaa
acaggaaaattggctaagcaagccgatggagcagtagaagttcgtatgggtaatactatg
ttactggctactgtagtatctgcacaagaggcaggagaaggtgttgattttatgcctttg
caagtagagtataaagagaaattttcagcgtttggacgttttcccggaggttttacaaag
agagaaggtcgggcttctgattatgaaatcttaacatcccggttggtggatcgggtatta
cgtcccttattcccggataattaccatgctgatacatttgtaaatattatcttattttca
tcagacggtaaagatatgcctgatgcattggccggtttggcagcttcagcagcattggct
gtttctgatattccttttaacggtcctatttctgaagtacgtgttgctcgtattgatgga
caatttaaaataaatccgacttttgaagaactggccaaagctgatattgatttgatggtg
ggtgccaccatagacaatatcatgatggtagagggagaaatggatgaggtctcagaagct
gaattattagaagcattgaagtttgcacatgaggctataaaggttcaatgtcaagtccaa
atagaattggcagaggccgtaggttctacagtaaaaagaacatattgtcatgaggtgaat
gatgaggaacttcgcaaagacgtttgggagaaatgttacgacaaagcttatgaaatagct
cgttctggtaacacgaacaagcatgaacggatggctgcttttgatggaatcgtagaagat
tatttagcagcaatggacccagaggcagcagcagagaaagaagctttagtaaagcgttat
taccatgatgttgagaaagaagctatgcgtcgttgcatattggatgaaggaaagcgtctt
gatggtcgtaccacaacacaaattcgtcctatttgggcagaagtcgattatataccaggc
cctcacggatcggctgtgtttactcgtggagagacacagtctctttcaacagtaactttg
ggtacaaaattggatgaaaaaatagtagatgatgttttggaccagagccgggagcgtttt
ttattgcattataatttccctccattctctactggggaagcgaaagcgagccgtggcgta
ggacgtcgcgaaatcggacatggtaatttggccaatcgggcgctaaaaagaatgattccg
gaagattatccttatgttattcgtgtggtatcagatatccttgaatctaacggttcatct
tctatggctacggtttgtgccggtacattagctcttatggatgctggagtacagataaag
aaacctgtatctggtattgctatgggattgattactgataagggtaatgctaaatttgcg
gtcttgtcagatatattgggtgatgaagaccatttgggagatatggactttaaagtgacc
ggaacgaaagatggtattactgccactcaaatggatattaaggtggacggtctttcctat
gaagttctcgaaaaagctttagctcaggctcgtgaaggccggatgcatattttgggtaaa
atattagagactataccggaaccaagagcagagatgaaacctcatgcaccgcgtattgaa
gtaatcaatattcctaaagatatgattggtgcagtgattggcccgggtggaaaaataata
caaggtattcaggaagcgactggagctgtggtgactattgaagaaatagataatattgga
cgtgtggaagtttctgctcccggccgagatgcaattaatgcagctatggcaaagattaaa
gggattgtcgctattcctgaagaaggagaggtatataccggaaaagtaaaatcaattttg
gcgtttggagcatttgtcgaatttatgccgggaaaagatggtctattgcatatctcagaa
ataagttgggataggatagattctatggaaaattcggggattaaagaaggagatgatgta
acggtaaaacttattgaaatcgataagaaaacaggaaagttccggttgtcaatgaaagct
cttcaacctcgtcctgaaagagcagaacgtacagagcgccctgaaaaggttgagcgccga
aataaacctttcaataagcctaaaaaagaagacaaagaataa
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