Coprobacter secundus subsp. similis: Cop2CBH44_22280
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Entry
Cop2CBH44_22280 CDS
T06867
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03030
DNA replication
copr03410
Base excision repair
copr03420
Nucleotide excision repair
copr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cop2CBH44_22280
03410 Base excision repair
Cop2CBH44_22280
03420 Nucleotide excision repair
Cop2CBH44_22280
03440 Homologous recombination
Cop2CBH44_22280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
copr03032
]
Cop2CBH44_22280
03400 DNA repair and recombination proteins [BR:
copr03400
]
Cop2CBH44_22280
Enzymes [BR:
copr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cop2CBH44_22280
DNA replication proteins [BR:
copr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cop2CBH44_22280
DNA repair and recombination proteins [BR:
copr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cop2CBH44_22280
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cop2CBH44_22280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BCI63875
UniProt:
A0A7G1HVU4
LinkDB
All DBs
Position
2763296..2766076
Genome browser
AA seq
926 aa
AA seq
DB search
MQEKKLFLLDAYALIYRSYYAFIKNPRINSKGLNTSAIFGFVNTLEDVLKKEQPTHIAVG
FDPAGPTFRHKAYEQYKAQREATPEDIRKAIPIIKDIIKAYNIPIIEVAGYEADDVIGSM
AQLAEKAGYDTYMMTPDKDYGQLVSDHIFIYKPKYGSNGFEIRGIEEIKQKFGIEQPKQV
IDILGLMGDASDNIPGCPGIGEKTATKLIQEFGSIEELLNNTDKLKGALRKKVEENIEQI
KFSKFLATIKTDVPLTFDEEELCRCPVNANRLREIFDELEFKNLAERVLSETINKTTITN
TPIQGSLFDVFTADSQDEKKYSILSELKSTPHNYYLIDNENKMRDLAQKLNLADSFAFDT
ETTGIEPMRVELVGLSFSLQENEAYYIPIPPNKEEAKLIVNIFKEALENTNSLKIGQNIK
YDYIVLKNYGVTVKGQFFDTMIAHYLLQPEQRHNMDYLAEVYLHYKTIPIEDLIGPKGKG
QLSMRDVPLEKICEYAAEDADITLKLKNILEKELHKENLENLFYTIEMPLVRVLSEMEIT
GVNVDTEVLSQYSLLLSNKIDILEKEIYEMAGTEFNVSSAKQVGEILFDKLKIDEKAKKT
KTGQYSTTEEVLEKLRSKHPIVGKILEQRGIRKLLSTYINALPELINPITGKIHTSFNQT
VTATGRLSSSNPNLQNIPIRDDEGKEIRRAFIPDKNCVFFSADYSQIELRIMADLSGDQN
MIDAFCSGEDIHAITASKIYKIPISEVSKDMRRKAKTANFGIIYGISVFGLSDRLNIPRS
EAKELINGYFETYPHIKEYMNKSIDIAREKGYVETISGRKRMLPDINSKNAIVRGYAERN
AINAPIQGSAADIIKIAMVRIYNRFEQEGLRSKMILQVHDELNFNVYTDEIEKVCNIVKE
EMENAYKLKVPLIADSGIGKNWLEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaaaaattattccttttagatgcatatgctcttatttacaggtcatattac
gcatttatcaaaaatccgagaatcaattcgaaaggattaaatacatcggcaatcttcggt
tttgtaaatacccttgaagatgttttgaaaaaagaacaaccgacacatatcgctgtaggg
tttgatcccgcagggccaaccttccgccataaagcttacgagcaatataaagcccaaaga
gaagctacacccgaagatattcgaaaagccattcctattataaaagatataataaaagcc
tataacattcctattatcgaagtagcaggatatgaagctgacgatgtaataggctctatg
gcccaacttgccgaaaaagctggatatgacacatacatgatgactcccgacaaagattat
gggcaattagtctcagaccatatttttatctacaaacctaaatatggaagtaatggcttt
gaaataagaggaatagaagaaatcaaacaaaagttcggaatcgaacaacccaaacaagtt
attgatattttgggattgatgggagatgcctccgataacatacccggatgtcctggaatt
ggagaaaaaactgcaactaaattgatacaagaatttggaagcatagaagaattactaaac
aatacagataaacttaaaggtgctctccgtaaaaaagtagaagaaaatattgaacaaata
aaattttcaaaattcctggccactataaaaacggacgttcccttgacctttgacgaagaa
gaactttgtcgttgtccagtaaatgccaacagacttcgcgaaatcttcgatgagcttgaa
ttcaaaaatttagcagaaagagtattaagtgaaactattaataaaacaactattacaaat
acacctattcaaggctctctctttgatgtatttacagccgactcccaagacgaaaaaaaa
tattcaattctcagtgagttaaaatcgacccctcacaactattatttaattgataatgag
aataaaatgcgagatttagcccaaaaattaaatctcgctgattcgtttgcatttgataca
gaaacaacaggtatcgaaccgatgagagtagaattagtcggtttatccttttctctgcaa
gaaaatgaagcatattacatacccattcctccaaacaaagaagaagcaaaactcattgtt
aacatatttaaagaagcattagaaaatacaaattctttaaaaatcggccaaaatatcaaa
tatgactatattgttctaaaaaattatggcgtcactgtcaaaggtcaatttttcgatacg
atgattgctcactatcttttacaaccagagcaaagacacaacatggactacttagccgaa
gtatatttacactacaagactattccaatagaagatcttataggtcctaaaggaaaaggt
caactatccatgagagatgttcccctcgaaaaaatttgtgaatatgcagctgaagatgca
gatattactttaaaattaaaaaatatactggaaaaagaactccacaaagaaaatctagaa
aatctattttatactatagaaatgcctttagtcagagtattaagcgaaatggaaattacc
ggagtaaatgttgatactgaagttctttcccaatactctctcctactctcaaataaaatt
gatatcctcgaaaaagaaatttatgaaatggcaggtacggaattcaatgttagttcagcc
aagcaggtcggggaaattctatttgacaaactcaaaatagatgaaaaagcaaaaaaaaca
aagacaggccaatattccacaacagaagaagttcttgaaaaactacgttctaaacatccc
attgtcggtaaaatcctagaacaaagaggtattcgtaaacttctcagtacatatatcaat
gcattgcctgaacttataaaccccataacagggaaaatacacacttcgttcaatcagaca
gtcacggcaacgggccgattaagctccagcaatcctaatcttcaaaatatacccatacga
gatgatgaaggaaaagaaatacgacgagcatttatccccgacaaaaattgtgtgtttttt
tctgctgattattctcaaatagaactccgaataatggcagatttaagcggggaccaaaac
atgatagatgcattctgctccggagaagatatacatgctattaccgcctccaaaatctat
aaaatacctatttcagaagttagtaaggacatgcgaagaaaagcaaaaacagctaatttc
ggtattatttatggaatatcagtattcggattgtctgatagactaaatattcccagaagc
gaagcaaaagaacttatcaatgggtacttcgaaacttaccctcatatcaaagaatacatg
aacaaaagtattgatatcgctcgtgaaaaaggatacgtcgaaacaataagcggacgcaaa
agaatgttacccgatatcaattcaaaaaatgcgatagttagaggatatgccgaacgaaat
gcaatcaatgctccaatacaaggaagtgccgccgatatcataaaaatagcaatggtacgt
atttataatagatttgagcaagaaggtcttcgctccaaaatgattttacaagtccatgat
gagcttaatttcaatgtatataccgatgagatagaaaaagtttgtaacattgtcaaagaa
gagatggaaaatgcctacaaattaaaagtccctctaattgcagattctggaattggtaaa
aattggttagaggcccactaa
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