Coprobacter secundus subsp. similis: Cop2CBH44_22890
Help
Entry
Cop2CBH44_22890 CDS
T06867
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
copr
Coprobacter secundus subsp. similis
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
copr02000
]
Cop2CBH44_22890
Transporters [BR:
copr02000
]
Other transporters
Pores ion channels [TC:
1
]
Cop2CBH44_22890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
CooC_C
Big_1
EF-hand_1
Ephrin
EF-hand_5
EF-hand_6
Motif
Other DBs
NCBI-ProteinID:
BCI63936
UniProt:
A0A7G1HW62
LinkDB
All DBs
Position
2848772..2852044
Genome browser
AA seq
1090 aa
AA seq
DB search
MKFLYINKKIVNKKGLIVLLMLFFILPAMAQSFVVTGTVTDAKGEELPGVTVRVKGESNG
TITDIKGKYSIRVPLKSNELIFTYVGYVSKTISIPKNSKTLNVVLEEDVKTLGEVVVVGY
GQMRKSDLTGAISSVSVNDVETMTSTNIQSLLQGRAAGVQVTASDAAPGAAINMKIRGTG
SLTGSSEPLYVVDGIIMNSTMDQNILSGESGTTAPSQNGLTGINPQDIESFEVLKDASAT
AIYGSLGANGVVLITTKSGKTEKPKMQYTGSVSTSHITNKRDLMTLEEYIPFKNELGLAQ
GSSKLQNLVIDGKIPVDWQDWATRQAWSHSHRMNISGKTDKTKYYVSGGYNDLQGVIRST
GSKAMDIRINFDQEVSSRLRIGTRTSFMHSKLNMTSGSNASAFASSGLLRQILTFRPYRL
VAGSEDDYIDENEGVTDMDSEDAYGPNPYLKDYEDFTKEYRVLSSVYLDIKLVKWLSMRT
TVGVDYRYRTRQQYYGVTTSNGRNNGGMSQVSNKENMRLNIDHMFNANYRFGKNRLEGTL
GVTATTSTDKNRLNVGRSFSVLGFREEGLMYSGTINPPQYTLSPTNSLSFLGRVIYNYDE
RYVLTATFRADGTSKFAPENRFSYFPSFALAYRLDQENFFRKYRWLSNAKIRLGWGMVGN
QNITPYQTLQLYGSNTYSNALGSGYYAGFELERIANPTLKWETTQQYNVGFDLGLLRNRI
NFTVDLYNKSSYDLLQNIEMPLSSGYSRMYINRGSIRNRGIEISLDLAPVRTKKYSLNIG
GNISFNKNKIMDIGLEQSQIGANNWAYFLGTDVGNASYFKHAANIFIEGRPVALFYGLKT
SGILTQAEVDEDRRVRMQNFLAVHPTVSPDAVTKENLMSVRGTLPIWSGTQNELLEAGDF
RYFDADGNGYIEADADRTIIGDPNPKFTYGFTVDFTYQDFFVNAVFNGVYGNQIANSNRM
LEEDIKTIHVNYNATRYIRDHYWREDRISTTDPRMNYAGDAGRFSSYYVEDGSFLRFANL
TIGYNINLRRNKFISRVGLSLTGTNLFVITKYRGYDPEVNSFANDPFRVGVDWTSYPKNR
TYALGVTLDF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctgtatataaataaaaagatagtaaataaaaaaggcctgatagttttatta
atgctttttttcattttgcctgcgatggctcaaagcttcgttgtaaccggtacagtgacc
gatgcaaaaggtgaagagcttccgggagtaactgtccgggtaaaaggtgagagtaatgga
accattaccgacataaaaggaaaatactcgatacgtgtaccgttaaaaagtaacgaatta
atttttacgtatgtaggatatgtttctaaaacaatatccataccgaagaacagtaaaaca
ttgaatgtcgttttggaggaagacgtgaaaacgttgggagaagttgtcgttgtgggatat
ggtcaaatgagaaaatcagaccttaccggtgcaatttcttcagtttcggtaaatgatgtc
gaaacaatgaccagtaccaatatccagtctttattacagggtcgtgctgccggagttcag
gtaacggcaagcgatgcggctccgggagcagctataaatatgaaaatcaggggcacaggt
tcattgaccggttcgagtgaacctttgtatgtggtagatggaattattatgaattcgact
atggaccagaatattctttccggagaatcgggtactacagctcccagtcaaaacggactc
accggaattaatcctcaggatatcgaaagttttgaggtattgaaagatgcatcggctaca
gctatttatggctcgttgggagcgaatggggttgttttgattactacgaagagcggtaaa
acagaaaaacctaaaatgcaatataccggaagtgtttcaacatcgcatattacaaataag
cgtgatttaatgactttggaagaatatattccatttaagaatgaactgggactggcacag
ggaagctcgaaattacaaaatctcgttatcgatggaaaaataccggtagattggcaggac
tgggctacccgtcaggcctggagccacagtcaccggatgaatatttcaggtaaaacggat
aaaaccaaatattatgtatcgggtgggtataacgatcttcaaggagtaattcgttcgaca
ggaagtaaagcgatggatatacgtattaattttgatcaggaagtttcgtcccgattgaga
attggtacgcgtacatcgttcatgcactctaagttaaatatgacgtcaggttcgaatgcc
agtgcttttgcatcgtcgggtttgttgagacagatactgaccttccgtccttacaggctg
gttgccggtagcgaagacgattatatcgatgagaatgagggggttacagatatggattcg
gaagatgcatatgggccgaatccttatttaaaagattatgaggattttacaaaagaatac
agggtactttcttctgtttatttagatattaaactggtcaaatggttgtctatgagaacg
accgtaggggtagattaccgatatcgtacgcgacagcaatattatggagtaaccacctcg
aacggacgtaataatgggggaatgtctcaggtttctaacaaagagaatatgcgattgaat
atagaccatatgttcaatgcgaattacagatttggaaaaaaccgtctggagggaacgttg
ggtgtgacggcaaccacgtctaccgataaaaaccgtctgaatgtaggccggtcgttttct
gtactgggattcagagaagaaggattgatgtatagcggaaccattaatcctcctcaatat
acgttgtctccgactaattcgttatcctttttaggtcgtgttatatataattatgatgag
cgttatgtattgacagcgactttccgtgcagacggtacgagcaaatttgcgcctgaaaac
cggtttagctatttcccgtcttttgcattggcctaccggttagaccaggaaaatttcttt
cgaaaataccgatggttatcgaatgccaaaatacgtttaggctggggtatggtcggaaat
cagaatattacgccttaccagacattacaattatatggaagtaatacctattcgaatgct
ttagggtcgggttattatgccgggtttgagctggaaagaattgctaacccgacattgaaa
tgggaaacgacacaacagtataatgtaggttttgatctcggattgttgagaaacagaata
aattttactgtcgacttatataataaaagttcgtatgatttattacagaatatagaaatg
cctctctcatccggatattcaagaatgtatataaaccggggatctatcaggaacagaggt
atagagatttcgttagatctggctcctgtcagaacaaagaaatattcgttgaatattggg
ggaaatatttcgttcaataaaaataaaataatggatatcggtcttgaacaatctcagata
ggggctaataactgggcttattttctgggtacggacgtaggaaatgcttcttattttaaa
catgctgcaaatatttttatagaaggccggccggtcgcacttttctatggtttgaaaacg
tccggaattttaactcaggccgaggtcgatgaagaccggcgtgtacgtatgcagaacttc
ctggctgttcatccgacggtttctcctgatgctgttacgaaagaaaatcttatgtcggtg
cggggaacattaccgatatggtcgggtacacagaatgaactcctggaagccggtgatttt
cgctatttcgatgcagatgggaatggatatatcgaagctgatgcagaccgtactataatc
ggagatcctaatcctaaatttacgtatgggtttactgtcgattttacttatcaggacttt
ttcgttaatgccgtatttaacggagtgtatggtaatcagatagctaattcgaaccggatg
ctggaagaagatattaaaacgatacatgtaaattataatgctacccgctatataagagat
cactattggcgtgaagaccggataagcacgaccgatccgaggatgaattatgccggagat
gccggacgttttagcagttattatgtagaagacggaagctttttaagatttgcgaatctg
accataggatataatatcaatctcaggagaaataaatttatttcccgggtgggactgagt
cttacaggcactaatttattcgtaataacaaaatacaggggatatgaccctgaagtgaat
tcttttgcgaacgacccattccgggtaggagtcgattggacttcttatcctaaaaacagg
acttatgctttgggagtaacacttgatttttaa
DBGET
integrated database retrieval system