Coprobacter secundus subsp. similis: Cop2CBH44_23040
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Entry
Cop2CBH44_23040 CDS
T06867
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
copr
Coprobacter secundus subsp. similis
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
copr03032
]
Cop2CBH44_23040 (topA)
03400 DNA repair and recombination proteins [BR:
copr03400
]
Cop2CBH44_23040 (topA)
Enzymes [BR:
copr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cop2CBH44_23040 (topA)
DNA replication proteins [BR:
copr03032
]
Prokaryotic type
DNA Topoisomerases
Cop2CBH44_23040 (topA)
DNA repair and recombination proteins [BR:
copr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cop2CBH44_23040 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
BCI63951
UniProt:
A0A7G1HZL3
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All DBs
Position
complement(2876281..2878629)
Genome browser
AA seq
782 aa
AA seq
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MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKDFSIDIEHNYTPIYEIPSDK
KKLVDTLKDEAKKSETVWLASDEDREGEAIAWHLSEVLKLKPEHTKRIVFHEITQSAILN
AIENPRAIDINRVDAQQARRVLDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVEREK
EIKNFISEASYRIIATFLIPSENGNPIELKAELNKRLKTKEEALNFLEACRQANFTIEDI
SVRPAKKSPAPPFTTSTLQQEAARKLGYSVAQTMMIAQRLYESGFITYMRTDSVNLSSLA
INTSKEEIISSLGEKYLKIRHYQTKSKGAQEAHEAIRPTYMSQKEIDAPSQERRLYELIW
KRTIASQMSDAELEKTTAVINISSRNEKFVATGEVLKFDGFLKVYLESQDDENEGENNEK
MLPPLSLKQELKYNDIEATERFTQRPPRYTEASLVHKLEELGIGRPSTYAPTISTIQQRE
YVEKGDREGTERKYNTLLLKNGNIKDCTKTEITGAEKAKLIPTDIGIVVNDFLVQYFPDI
MDYNFTANVEQTFDHIAEGKLPWSNAIDQFYKLFHPVVKDALEMKMEHKVGERILGTDPK
SGKPVSVKIGRFGPLIQIGTPDDEEKPQFASLLKGQSMSTITLEEALKLFDLPRTLGDYE
NKLVSVGIGRFGPYIRHDGKYVSLPKTLEPLSVTLDEAIELIKAKREQESQRLIKSFPED
SELEVLNGRYGPYIAYKKKNYKIPKGTEPKELSFDACMQIIKESDEKIPSEKKRTGRKKA
SK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatttagtcatagtcgaatctcccgcaaaagcaaaaactatagagaaattt
ctggggaaagatttcaaagtattatcgagttacggccatatccgagacttgaaaaagaaa
gacttcagcatcgatatagagcataactatactcctatatatgaaataccttctgacaaa
aagaaattggtagatactcttaaagacgaagcaaaaaaatcagaaacagtatggctggcg
tccgatgaagaccgtgaaggagaagccattgcttggcacttatctgaagtgttaaaatta
aaacctgaacatacaaaaagaatcgtatttcatgagataacccaatctgccattctcaat
gcaattgaaaatccgcgtgcaatagatattaacagagtagatgcacaacaagctcgtcgc
gttctcgaccgcattgtgggatttgaactttcacctgtactatggaaaaaagtaaaacca
gcattatctgctgggcgagtacaatctgtggccgtacgtcttatcgtagaacgagaaaaa
gaaataaagaactttatttcagaagcctcataccggattatcgcaacatttttgattccg
tcggaaaacggaaatccgatagaattaaaggctgaattaaataaacgactgaagactaaa
gaagaagccttaaatttccttgaggcttgccgacaggcaaattttacaatagaggatatt
tctgtacgtcctgcaaaaaagtctccagcccccccctttaccacatctactttacaacaa
gaagctgcccggaaattaggatattcggttgcacaaaccatgatgattgctcaacgtctg
tatgagtcaggatttattacttatatgcgtacagactctgtcaatttatcgtcattggca
ataaatacatctaaagaagaaattatatcttccttaggagaaaaatatcttaaaataaga
cattatcagaccaaaagtaaaggtgcacaagaagctcacgaagccatacgtccaacttat
atgagtcaaaaagaaattgatgcaccctctcaagaaagacgtctgtatgaacttatatgg
aaacgaactatcgcttcacaaatgagcgatgccgaactcgaaaagacaactgctgtaata
aacatatcttcacgaaatgaaaaattcgtggctaccggagaagtcctcaaattcgacgga
tttctgaaagtttacctcgaatctcaagatgatgaaaacgaaggtgaaaacaatgaaaaa
atgttaccgcctttatcactaaagcaagagctgaaatataacgatatagaggctacagaa
aggtttactcaacgtcctccccgatataccgaagcaagcctcgttcataaattggaagaa
ctaggtatcggacggccatcaacctatgcacctacaatctctacaatacagcaacgtgaa
tatgtagaaaagggagaccgtgaaggtacagaacgtaaatataatactctgttacttaaa
aatggaaatataaaagactgtacaaaaaccgaaataaccggagcagaaaaagcaaaacta
atacctacagacataggtattgtcgtaaatgactttctagtacaatattttccagatatt
atggattataattttactgctaatgtagaacagactttcgaccatattgctgaaggaaaa
ttaccatggtccaatgcaatagaccaattttacaaattattccatccggtagtgaaagat
gctctagaaatgaaaatggagcataaagttggtgaacgaatattgggaacagatcctaaa
tcagggaaaccagtttcagtaaaaatcggtcgattcggtccactcatacaaatcggtaca
ccagatgacgaagaaaaaccacaatttgcatctttacttaaagggcaatcaatgagtaca
attactttagaggaagcactcaagttatttgatttaccgcggactttaggtgattatgaa
aataagcttgtctctgtcggtataggccgatttggcccatatatacgtcatgatggaaaa
tatgtttcccttccgaaaacactcgaaccgctttccgtaacactcgatgaagcaatagaa
ctgataaaagccaaacgcgagcaggaaagccaaagattaataaaaagtttccctgaagac
tctgaattagaagtactcaatggacgatatggcccttatattgcttacaaaaagaagaac
tacaaaattccgaaaggaactgagccaaaagagctttctttcgatgcctgtatgcaaata
ataaaagaaagcgatgaaaaaattccctcagaaaaaaagcggacaggaagaaaaaaagca
tctaaataa
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