Coprobacter secundus subsp. similis: Cop2CBH44_24810
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Entry
Cop2CBH44_24810 CDS
T06867
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr00470
D-Amino acid metabolism
copr00550
Peptidoglycan biosynthesis
copr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cop2CBH44_24810 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cop2CBH44_24810 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
copr01011
]
Cop2CBH44_24810 (murD)
Enzymes [BR:
copr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Cop2CBH44_24810 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
copr01011
]
Precursor biosynthesis
Amino acid ligase
Cop2CBH44_24810 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
3HCDH_N
TscT
DUF2387
Motif
Other DBs
NCBI-ProteinID:
BCI64128
UniProt:
A0A7G1I152
LinkDB
All DBs
Position
complement(3112012..3113349)
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AA seq
445 aa
AA seq
DB search
MSKRIVVLGAGESGAGAAVLAKVKGFDVFVSDMSLIKDKYKNLLNQYNIVWEEGHHTQEL
ILNADEVIKSPGIPENAPIIEALRERNIPVISEIEFAGRYTHAKMICITGSNGKTTTTLL
TYHILKNAGLNVGLAGNVGQSLAYQVATQNYDYYVIELSSFQLDNMYNFKANIAILLNIT
PDHLDRYGYNMQNYIDAKFRITQNQTEDDVFIYWNDDPVISKELKAHHLKAKLFPFAETH
EDGVKAYKKDHDIIIEAPDTTFSITDQELALQGRHNLFNSMAASISANVLDIKKEDIRAA
LSDFQGVEHRLEKVARIRGVEFINDSKATNVNSCWYALESMRTKVVLILGGKDKGNDYTE
IESLVHDKVKAIICLGVDNSKLHAFFDGKVDTIQDASSMKEAVDKAFAVAQPGDTVLLSP
CCASFDLFKSYEDRGTQFKECVKNL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgaattgttgttttaggagctggagaaagcggtgcaggtgctgccgtactg
gccaaggtaaaaggattcgacgtctttgtgtcagatatgtcgcttatcaaagacaaatat
aaaaaccttctcaatcagtataatatcgtttgggaagaagggcatcacacacaagaactg
atactcaacgccgatgaagtaataaaaagtcccggaatacccgaaaacgcccctataata
gaggctttacgggaacggaatatccctgtcatttcagaaatagaatttgccggacgatac
acgcatgccaaaatgatatgcataaccggcagtaacggcaaaacaacgacaacattactg
acttaccatatactcaaaaacgccgggctcaatgtagggcttgccggaaacgtagggcag
agccttgcttaccaggtagcgacacaaaattacgattactatgtcatagagttgagcagt
tttcaacttgataacatgtacaattttaaagccaatattgccattttactgaacataacc
cccgaccaccttgaccgatatggatacaatatgcaaaactatatagatgcaaaattccgt
atcactcagaaccaaacggaagacgatgtattcatttattggaatgacgatccagtcata
tcaaaagaattgaaagcccatcatctcaaagcaaagctattcccgtttgcggaaacccac
gaagatggagtcaaggcttataaaaaagatcatgatatcattatagaggctccagatacc
actttttctataactgaccaggaactcgcattacaaggcaggcacaacctgttcaactca
atggctgccagcatttcggccaatgtcctggacataaagaaagaagacatccgcgcagca
ttgagtgatttccagggagtggaacaccggcttgaaaaagttgcacgtatccggggagta
gaattcatcaatgactcaaaagcgaccaatgtaaactcctgctggtatgcattagaaagt
atgagaaccaaagtggtcctgattttaggagggaaagataaaggtaacgattataccgaa
atagaatcactggtacacgataaagtaaaagctatcatttgtctgggagtcgataatagc
aaacttcatgctttttttgacggaaaagtagatacaatacaagatgcctcatccatgaaa
gaagccgtcgataaagcttttgccgtggctcaaccgggtgataccgtattactatctcct
tgctgcgccagtttcgacttattcaaaagttacgaagaccgaggtactcagttcaaagaa
tgcgttaagaacttataa
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