Coprobacter secundus subsp. similis: Cop2CBH44_27980
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Entry
Cop2CBH44_27980 CDS
T06867
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr03420
Nucleotide excision repair
copr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cop2CBH44_27980
03430 Mismatch repair
Cop2CBH44_27980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
copr03400
]
Cop2CBH44_27980
Enzymes [BR:
copr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cop2CBH44_27980
DNA repair and recombination proteins [BR:
copr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cop2CBH44_27980
MMR (mismatch excision repair)
Other MMR factors
Cop2CBH44_27980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_12
CYP38_PsbQ-like
Motif
Other DBs
NCBI-ProteinID:
BCI64445
UniProt:
A0A7G1HXK0
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Position
3543119..3545464
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AA seq
781 aa
AA seq
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MEEFLQDLNESQQQAVLYNEGPSLVIAGAGSGKTRVLTYKIAFLLESGYAPYNILALTFT
NKAAREMKERIASIVGGPTAARLWMGTFHSIFSRILRVNADRLGFTSDFTIYDTSDSRSL
LKSIIKEKDLDDKIYKPASVQAIISNAKNALITPQAYQVNKDLVESDERAKRPLIKDIYQ
TYWNRCQKAGVMDFDDLLLYTNILFRDHPDVLERYRQIFRFILVDEYQDTNFAQHLIIHQ
LSKGHNHICVVGDDAQSIYSFRGANISNILNLKSDYPGCKTFKLERNYRSTQNIVRAANS
LIDKNKEQIRKQVYSENAVGNKIDVLSAYSDFEEGYMVANRVSEMKRLSKYAYNDFVILY
RTNAQSRIFEEALRKKNIPYRIYGGLSFYQRKEIKDVIAYFRLAINPHDEEAIKRVINYP
ARGIGDTTLGKIIECGIHNDVSLWQVIATPLEYTLPVNNGTLNKIQKFKELIEEFIDANN
KMNAMDIAELIIRRSGIFTEIYANRSPENLSRQENLQELMNGIQEFCSLRQEEGVEEIAL
TDFLAEISLATDQDEKEDDDSDKVTMMTIHASKGLEFKNVFVVGLEEDLFPAALSKNSER
ELEEERRLLYVAITRAEENCALSYAATRYRNGQPTAMPPSRFLKDIDPTYLNMPSELKSK
QNVEDSIYSFSSRSLGMYSSSRSSFFKREEPVLPSKKQDLPLKSYSPRLKRLDAVNTSSV
SGGSVSITGLDVGARIRHDRFGSGIVTEISGEGDNRKIGVEFEQVGKKQLLLKFAKFTII
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaatttttgcaggacttgaatgaaagccagcagcaggctgtgctatataatgag
ggaccgtcactggtgattgctggagcgggatcaggtaaaactcgtgtacttacatataag
attgcttttttgctcgagtcgggttatgctccatataatatattggcattgacttttacc
aataaagctgcaagggagatgaaagaacggattgcgtctattgtgggaggcccgactgct
gcccggctgtggatggggacttttcattctattttttcgaggatattacgagtaaatgcc
gaccgtttgggatttacttcagattttacgatttatgatacttctgactcgagaagcttg
ttgaaaagtattataaaagaaaaggatttggacgataagatatataagcccgcgtcggta
caagcaatcatatcgaatgcaaagaatgctcttattactccgcaagcttatcaggtgaat
aaagatttagtggaatctgatgagcgtgcaaaaaggcctttgataaaggatatttatcag
acttattggaatcgatgccagaaagcaggagttatggattttgatgatttgctgttgtat
acaaatatattgtttcgtgatcatccggatgtattagaacgataccgtcagatatttcgt
tttatactggtagatgagtatcaggatactaattttgcccagcatcttattatacatcag
ctgtcgaaaggccataatcatatttgtgttgtaggagatgatgctcagagtatatactct
tttaggggagcgaatataagtaatatattgaatcttaaaagtgattatccgggatgcaag
acttttaagttagaacgaaattatcgttctacacagaacattgtcagggcagcaaatagt
ttgattgataagaataaagaacagatacgtaagcaagtatattcggagaacgcggtagga
aataaaatagatgtgttgagtgcttattccgattttgaagagggatatatggttgccaac
cgtgtgtcggaaatgaaaagattatcaaaatatgcatataatgattttgtgatattgtac
cgcacaaatgcccaatcacgtatttttgaagaagcattgcgcaagaagaatataccttat
cgtatatacggaggtttatccttttatcagagaaaagaaataaaagatgtaattgcttat
tttcgtttggcaattaatcctcatgatgaggaggctataaaaagggtgataaattatcct
gcacgaggcattggagatacaactctcggtaagattatcgaatgtggtatacataatgat
gttagcctgtggcaagttattgctacaccattagagtatactttaccggtaaataatggt
acattaaataaaattcaaaaatttaaggagcttattgaagagtttatcgatgcaaataat
aagatgaatgctatggacatcgcagaacttattattcgacgttcggggatttttacagaa
atatatgccaatcgttctcctgaaaatttgagccgtcaggaaaaccttcaagagttgatg
aatggtattcaagagttttgttctttgagacaagaagaaggggtagaagaaattgctttg
acagattttttggctgaaatatcgttggctaccgatcaggatgagaaagaagatgatgat
agtgataaggttacgatgatgacgattcacgcatcgaaaggattggagtttaagaatgtt
tttgtggtaggattagaagaagatttgtttccggcagcactgagcaaaaatagtgagcga
gaactggaagaagaacggaggctgttatatgtagcaattactcgagcagaggagaattgt
gccctttcgtatgcggctacccgttatcgtaatggacaacctacggcaatgccccctagt
aggttcttaaaggatattgatccgacatatttgaatatgccttcagaattgaagtccaaa
caaaatgttgaagatagtatttatagcttttcttctcgttcattgggcatgtatagttct
tctcgttcatctttttttaaacgggaagagccggttttaccttctaagaaacaagatttg
cctcttaaatcatattctcctcgtttgaaacggttagatgctgtgaatacttcgtctgta
tccggagggtcggtttctattacaggattggacgttggagctcggattcgacatgataga
tttggatcggggattgtgacagaaatatcaggagaaggggataatcgaaaaattggagta
gagtttgaacaggttggtaaaaagcagcttttgcttaagtttgctaagtttaccattatt
aaataa
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