Commensalibacter melissae AMU001: D9V35_00480 Help Entry D9V35_00480       CDS       T05684                                  Name (GenBank) collagen-like protein   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism coq  Commensalibacter melissae AMU001 Pathway coq04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:coq00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     D9V35_00480  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:coq00536]     D9V35_00480 Glycosaminoglycan binding proteins [BR:coq00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    D9V35_00480 SSDB OrthologParalogGFIT Motif Pfam:  Gp77 Collagen Motif Other DBs NCBI-ProteinID:  AYN86103 LinkDB All DBs Position 109198..112956 Genome browser AA seq 1252 aa AA seqDB search MNCDQGSRIIIVPAGCLGHREIDLQCKSPLESVYYQFSMVNRLSPSDAISCVSAQPSDET LSVDRITVSGQTFRARISGGTMNTKTGIRFLVTTRANEEREFVVTLPIMPEGIMGSGEAG NYVLGDTGPQGPQGCAATVTVGKVLPTEPDGDPKIVNSGTEVDAVLDFTLPRGQVGPQGE RGQAATVKIGNVVTGAAGSDAAVENRGDEHNAVLDFTIPEGRQGIQGIQGKAGTQILLSN RDPVARDAKENIVWLNDVTGDLFETVSRGGDAYSWHKSGNLKGEAGSIIYTGTVDPVYNE VYKKSDLYFNITNSNLFTFNDNQWVRLANLKGDQGERGSLWFFAQEDPVTSSSYRVGDSF LNTASNDLFVFNGTNWQKVGNLQGKQGGIGPQGLQGDTGPQGLQGIQGEKGEAGKDGRDG FDGTRIITSQQDPDQGSAPLNPNVVWINTTSWEVKRTIPHGDSWDWVSLGSIRGPRGGIG PQGLQGDTGPQGLQGIQGEKGEAGKDGRDGFDGTRIITSQQDPDQGSAPLNPNVVWINTT SWEVKRTIPHGDSWDWVSLGSIRGPRGDTGPQGLQGLQGEKGAKGDDGSRWYSGHNLPDA TIGLNDPRGMPRAGDQYLYLDEKTGEASAYIYTNDKTWGGPLGKVAGPQGKAATVRAVEQ VRPLRPDEAATIKNIGDEHDAILQFSIPKGEKGDVGPIGKEGAAATIRIGTVTTTDPDVQ ASVRNSGSENTAVLEFSIPKGEKGDSYTNDGSTELNVKSIQSDGGKVGTDGAGKLSAEML DYTIKVPTPSHQDASLGKVVDLAHQAIPNIEINHPNGVAGLDARGQLTQPINNPFIITQS INPDAKVSIYLDDDVHAYADKTLFDIYTVGAQSKIIAFAPSEGIADILASAKADKIEELK GYIFAGGACWLPDCQPLEFKGYQGSYTFVCYGSDMDKSGYKIKTDIICENQLVDGKGEAF KKDAIITIRVGDVVTLMAHWMDQNRTYYYVKRSRSAGLLSNLYLSEKEQPKTITSLGYQD EIRFGKDGIFWCSKEGGEGQAEWSLYPSYAAMKKDHTGKFTYPYVTPTTKDKLPVDYPIG TQSYDIDKKEPLWWNGTEWIDPVAKAATIKIGNIVSVEADQPAQITNSGSDINAVFDFSI PKGEKGQQGISVESVIMNDDLTFSFMMSNGSIEKVNSGLYRNKDGVVIAPEKVSEIPNDF SLNGNLYIASDDYLNGSKKMPEGLSLNGNIVLTDGSVYYKNSWNNGGVLCVA NT seq 3759 nt NT seq  +upstreamnt  +downstreamnt atgaactgtgatcaaggcagtcgaattattatcgttccagctggatgtttgggacatcgt gagattgatttgcaatgtaaatcaccattggaaagtgtctattaccagttttcaatggtc aatcgcctttctccctctgatgcaatcagctgtgtaagtgcccaaccttcagatgagaca cttagtgttgaccggattacggtatctgggcagacctttagggcacgtatcagtggaggg acaatgaataccaaaaccggtattcgttttttggtaaccacacgtgcaaatgaggaacgt gagtttgttgtgacattgccaattatgccggaaggaatcatgggcagtggcgaggctggc aattatgtattgggggatacgggtccccagggtcctcaaggatgtgccgcaacggttacg gttggcaaggttctgcctacagaacctgatggggatccaaagattgtcaattcgggaacc gaggtggatgccgttctggatttcaccttgccccgtggtcaggttgggcctcagggtgag cggggccaggccgcgacggtaaagattggaaatgttgtgacaggtgcggcagggagtgat gctgctgttgagaacaggggtgatgagcataacgctgttcttgattttaccattcctgaa ggtaggcaaggcatacaggggatacaggggaaggcaggcacgcaaattctgttgtccaat cgtgatcctgttgcccgtgatgccaaggaaaatattgtctggctcaatgatgtcacagga gatttgtttgaaactgtttcccggggcggggatgcatatagctggcacaagtctgggaat ttgaagggggaggctggcagtatcatatatactggtactgtggatcccgtttacaatgag gtttataaaaagagtgatctctatttcaatattaccaacagcaacctgttcacatttaat gataatcaatgggtcaggctggccaatctgaaaggggatcagggagagagaggttctcta tggttttttgcccaggaggatcctgtaacctcttcaagctatagggtcggggatagtttc ctgaatacagcttccaatgatctgtttgttttcaatggcacgaattggcaaaaggttgga aaccttcaaggtaaacaaggtggtattggcccacagggattgcagggtgatactggcccg cagggactgcagggcattcagggagagaaaggggaagcaggcaaggacggcagggacggt tttgatggaacccgcatcatcaccagccagcaggatccggatcagggaagcgccccccta aacccgaatgttgtatggatcaacacgacgagctgggaggtcaagcgcaccattccgcat ggagatagctgggattgggtcagtcttggcagcatcaggggtccacgtggtggtattggc ccgcagggattgcagggtgatactggcccgcagggactgcagggcattcagggagagaaa ggggaagcaggcaaggacggcagggacggttttgatggaacccgcatcatcaccagccag caggatccggatcagggaagcgcccccctaaacccgaatgttgtatggatcaacacgacg agctgggaggtcaagcgcaccattccgcatggagatagctgggattgggtcagtcttggc agcatcaggggtccacgtggtgataccggcccgcagggattgcaggggttgcagggtgag aaaggtgcaaaaggggatgatggctcacgctggtatagtggtcataacttgcctgatgcg acaattggtcttaatgatccccgtggtatgccaagagcgggggatcaatatctttatctt gatgaaaagactggtgaggccagcgcctatatatacaccaatgacaagacctggggcggg cctttaggaaaagttgcgggaccccagggaaaagcggcaactgtcagggctgttgagcag gtgcggcctttaagacccgatgaggcggcaaccatcaaaaatattggcgatgaacatgac gcgatcctgcagttcagcattccaaaaggggagaagggggatgtgggcccgatcggaaaa gagggggccgcagctaccatacgtataggaaccgtgaccaccacagatccggatgtccag gcatccgttcgcaattcaggatcagaaaataccgccgtgctcgagttctccattcccaag ggagaaaagggggacagctatacgaatgacggatcaactgaactcaacgtcaagtcaatt cagtcagatggcggaaaggtcggaacagatggcgcgggtaaattatccgctgaaatgttg gattataccataaaggtcccaactccatcccatcaggatgcctctttgggtaaagtcgtc gatcttgctcatcaggccattccaaatattgaaataaatcatccaaatggagttgcagga ttggatgcacggggtcagttgactcaacctattaataatccgtttataataacgcagtct attaatcctgatgctaaagtttccatctatttagatgatgatgttcacgcttatgcggat aaaacactgtttgatatttacacggttggtgcacaaagcaaaattatagcatttgctcca tccgagggaatagctgatatcctggcatcagcaaaggctgataagattgaggagttaaaa ggatatatatttgctgggggagcctgttggttacctgattgtcagccgttagaatttaag gggtatcaagggtcatatacctttgtgtgttatggttctgatatggataaatcaggttat aaaattaaaactgatattatttgtgaaaaccagttggttgatggaaaaggggaagcattt aaaaaagatgctattatcactataagggttggtgatgttgtaactcttatggcgcattgg atggatcaaaataggacatattattatgttaagagaagtagaagcgctggattattgagt aatttatatttatcagaaaaagaacaacccaaaaccattacatcattgggatatcaggat gaaatacgatttggtaaagatggtatcttttggtgttcaaaagaaggtggagaaggacag gctgaatggtctttatatccgtcttatgccgcaatgaaaaaagatcatacaggaaaattt acttatccttatgtaacccctacaaccaaggataaattgcctgttgattatccaattgga acacaatcatatgatattgataaaaaagaacctctatggtggaacggtactgaatggatt gatccggttgccaaagcggcaacaatcaaaataggtaacattgtatctgtcgaagctgac caacctgctcaaataacgaattcaggatctgatataaatgcagtttttgatttttcaatt ccgaagggagaaaaaggacagcaagggattagtgttgaatccgttatcatgaatgatgat ttaaccttttcctttatgatgagtaatggttcaattgagaaagttaattccggtctttat agaaataaagatggagtagttatcgcgcctgaaaaggtttctgaaattccaaatgatttt tcattaaatggtaatttatacatagcttctgatgattatctcaacggcagtaaaaaaatg cctgaaggattgtcattaaacggtaatatcgttcttactgatggttctgtctactataaa aattcctggaataatggtggcgtgctttgtgttgcttaa

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