Commensalibacter melissae AMU001: D9V35_00540
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Entry
D9V35_00540 CDS
T05684
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
coq
Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_00540 (radA)
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D9V35_00540 (radA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
Rad51
ChlI
nSTAND_NTPase5
DUF7125
AAA_24
SLFN-g3_helicase
AAA_22
AAA_16
Lon_C
RecA_N
ADK_lid
nSTAND3
APS_kinase
AAA_30
ATPase_2
NTPase_1
AAA
AAA_14
SRP54
AAA_5
CbiA
GvpD_P-loop
MeaB
CobU
AAA_31
KdpD
NPHP3_N
NACHT
DAP3
ArsA_ATPase
AAA_19
IstB_IS21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AYN86113
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Position
124114..125499
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AA seq
461 aa
AA seq
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MAKKPVKMFVCQSCGAIYHKWAGRCEACGEWNTISEETRDTSPISVLGHAGRMIQFTGLD
GEISPPDRQSIGVSEFDRVLGGGLVQSSVTLVGGDPGIGKSTLLLQAACALSRQGQSVLY
ISGEESVNQIRMRANRLGLEDAEQRKNIQLAACINVADILSTLEKEKNISLVIIDSIQTM
WLDTANGAPGTVSQVRAAAFELIRMAKQKEFALIFVGHVTKEGSIAGPRVLEHMVDAVLY
FEGDRGHQFRILRAAKNRFGATDEIGVFSMTGQGLVEVANPSALFLAERHGHIAGSAVFA
GLEGTRPVLLEVQALLAPKFGDSAPRRTVIGWDNARLNMLLAILETRCSLRFNGVDVYLN
MAGGLRITEPAADLAVAAALVSALTHHSASPGSVYFGEIGLSGEIRQVPQADLRMKEAFK
LGFDEVVLPKRIAHGNNKLSVPNGLQLIELGHISDLVSQFT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaaaagccggttaaaatgtttgtctgtcaaagttgtggcgctatttatcataaa
tgggctggacgatgtgaggcttgtggtgaatggaatacaattagcgaggaaaccagggat
acaagtccgatttctgtactgggacatgcaggcaggatgattcagtttacagggctggat
ggtgagatttcacctcctgatcgtcagtccattggtgtttctgaatttgatcgtgttctg
ggtggaggtcttgtccaatcttcagttacattggtaggaggagatcctggcattggaaag
tcaactttattgttgcaggctgcttgtgctttatcaagacagggacaatccgttttatat
atttcaggagaggagtctgttaaccagataagaatgcgtgccaatcggttagggttagag
gatgcggaacaaagaaaaaacatacaactggctgcctgcataaatgttgcggatattctt
tcaacgctggaaaaagaaaaaaatataagtctcgttatcattgattctattcaaacaatg
tggctggatacggcgaatggggcccctgggacggtaagtcaggttcgggctgcggctttt
gaattgattcgtatggcaaaacagaaagaatttgcattgatttttgtgggacatgttacc
aaggaaggttctatagcggggccgcgtgtcctggaacatatggttgatgccgtattatat
tttgagggggatcgaggacatcaatttcgtattttacgggcagcaaaaaatcgatttggt
gcaacagatgaaattggtgttttttcaatgacaggacagggtttggtagaggtggcaaac
ccatctgctttattccttgcagagcgacatggtcatatagcggggtcagccgtttttgcg
ggtttggagggaacccgtcctgttttgttggaagtgcaggccttgttggcacccaaattt
ggggattcagcaccaagacgtacagttattggatgggataatgcacgccttaatatgttg
cttgctattttggagacacgttgttcgttacggtttaacggggtggatgtttatttaaat
atggcaggcggtttgagaattaccgaacctgcggcggatttggccgtggcagcagctttg
gtttcggctttgacccatcattccgcctctccaggttcagtgtattttggtgaaattggt
ttatctggagaaattcgacaggtgccacaagccgacttacgcatgaaagaggcatttaag
ctaggttttgatgaagttgttttacccaagcgtattgcacatggaaataacaaactatcc
gtccccaatggattacagctgatagaattaggtcatataagtgatttagtgtctcaattc
acataa
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