Commensalibacter melissae AMU001: D9V35_02985
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Entry
D9V35_02985 CDS
T05684
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq00550
Peptidoglycan biosynthesis
coq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D9V35_02985
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
coq01002
]
D9V35_02985
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
coq01011
]
D9V35_02985
Enzymes [BR:
coq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D9V35_02985
Peptidases and inhibitors [BR:
coq01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
D9V35_02985
Peptidoglycan biosynthesis and degradation proteins [BR:
coq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
D9V35_02985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
DUF4005
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AYN86529
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All DBs
Position
639403..640476
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AA seq
357 aa
AA seq
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MRKTSRNFFLVFFTAVYSYTLFYAHCAHAQYVGRISSIVMDVNGRVLSEQDADLKRFPAS
LTKMMTLYMAFRALNANAIRFDQRIPITIHAASMEPSKLGVRPGSYITVREAVLGLITKS
ANDAASALGEFIGGGDEERFAKMMTQQAKVLGMNRTRFYNASGLPNPGQLTTARDLAILA
QHLISDFPQYYPLFRTPYFYFRGRTIPNHDPLLKGYAGADGLKTGYTAAAGHNLVGSAVH
DNVRLIGVVMGAPSNGSRNQYMMSALDDGFAKSGVAPVARPVYLARTNSLKKHPRYNKHP
KVILVRATRTTRGKKSVEVAQASSRTSIAKKRDSIFKRNIKKAAVRHHTISRHNRKK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacgtctaggaattttttcttagttttttttacggctgtatattcttataca
ctattttatgcgcattgtgcgcatgcccagtatgtaggacgaatcagttcaattgtaatg
gacgttaatggccgagtcttgtcagaacaggatgctgatttgaaacggtttccagccagt
ttgacaaaaatgatgaccttatatatggcatttcgtgccttaaatgccaatgccatacga
tttgatcagagaattcctataaccattcatgcagcttcaatggaaccttccaaattagga
gtccgtccaggttcatatattactgtcagggaagctgttttaggcttgattactaaatcc
gcgaatgatgcggctagcgctcttggtgaatttattggaggtggagacgaagaacgcttt
gccaaaatgatgacacaacaggccaaagttttgggaatgaatcggacacgtttttataat
gcttctggccttccaaatcctgggcaactaacaactgcgcgtgatttggcaattttggca
caacatttgatttcggattttcctcaatattatcctttgttcagaacaccttacttttat
tttcgtggacggacaattcccaatcacgatcccttgttaaaaggttatgctggcgcggat
gggttaaaaacaggttatacagctgcggcagggcataatcttgtaggatcagccgttcat
gataatgtccgtttgattggtgttgttatgggtgcaccaagtaatggttcacgaaatcaa
tacatgatgagtgcactagatgacggatttgcaaaaagtggtgtggctcctgttgctaga
ccggtttatctggcaagaacaaattccttgaaaaaacacccacgttataataaacatcca
aaagtaattcttgttcgtgcaacccgtactacaagaggtaaaaagtcggttgaagtggca
caggcctcgtcacgtacttcaattgcaaaaaaacgggattcgatttttaagcgtaatatc
aaaaaggcggctgtgagacatcataccatatccagacataatcggaaaaagtaa
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