Commensalibacter melissae AMU001: D9V35_03745
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Entry
D9V35_03745 CDS
T05684
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D9V35_03745
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
coq01007
]
D9V35_03745
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coq03016
]
D9V35_03745
Enzymes [BR:
coq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
D9V35_03745
Amino acid related enzymes [BR:
coq01007
]
Aminoacyl-tRNA synthetase
Class II (U)
D9V35_03745
Transfer RNA biogenesis [BR:
coq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D9V35_03745
Prokaryotic type
D9V35_03745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AYN86665
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All DBs
Position
817281..819740
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AA seq
819 aa
AA seq
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MKFTLSWLHDHLDTNRSLEDICAALNKIGLEVEGVEDPDKTLAPFRTAKIISAEQHPNAD
RLRVCHVDAGKGFEDIQIVCGAPNARAGLITVLAPVGTYVPGSDITIKAGKIRGEQSNGM
MCSSRELNLGDDHDGIMELPVDTPIGVSYAEYAQLNDPVIEIAITPNRGDALSIRNIARD
LSVAGMGTLKPLKVSKIQAQFSSALSWNNQYEDACPWILGRTIRNVKNGPSPEWLQKRLR
AVGIRPISCLVDITNYFAFDLGRPLHVYDLDRIAGKQLTICRGNGEKFLALDEKEYQVTD
KDCVMIDEAGVQSLAGLMGGEKTGVSENTTDIFLECALFDPVLIALSGRRHMIVTDARQR
FERGVDQALLPDAIELATQMIIKLCGGQASDVVHAGQEPKWQRTATLHYNRLKDYGGLTV
SENRVSEILTNLGFVIAEKNSEWIRVDVPSWRNDIAMPIKMAYNSKLDVVKKDRLLDSVR
ALEGEADLVEEILRIEGLDKIPACSMPLIQPVPSPALTTDQERSILCSRMLAAQGLIETV
NFSFVDHEIAARLGEASESLRLMNPISNDMDQLRPTPLASILPVMQRNIARGIGDIGLFE
TGPAFTRNQERLIAAGARYGHMQRQYDGKAPKVTLWDVKKDVLTVLDGLGISIDSLKTVG
ETPNYYHPGRSGRLSLGPKNILAYFGELHPSLMKEFGFDQAPMIFEIMLDTVIPKKITRK
KAPVLSIFQPLKRDFAFVLKDGIPVEQLLQVVKQADRKYINSVELFDVYRGDKVQADHKS
VAVQVTIQPNDRTLKDEEIEAISQKIIKEVARLLGGNLR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacactgtcttggcttcatgatcatttggatacaaatagatctcttgaagat
atatgtgcagccttgaataaaatcggtttggaagtggaaggggtcgaggatcctgataaa
acactggcaccttttaggacagccaaaattatttctgccgaacagcatcccaatgctgac
cgtcttcgtgtttgtcatgttgatgctggtaaaggatttgaagatattcagattgtttgt
ggtgcacccaatgcccgtgctgggttaataacggttttggcacctgttggtacctatgtg
cctggaagtgatattacaatcaaagcgggtaaaatccgtggagagcaaagtaatggcatg
atgtgttcttcccgtgaattaaatctgggagatgatcatgatggtattatggaattgcca
gttgatactccaataggtgtatcttatgcagaatatgcccagttgaatgatccagtcatt
gaaattgctatcactccaaatcgcggtgacgcattatcaataagaaatatagcccgagat
ttgtctgtcgccggtatgggaacattgaaaccactgaaggtttcaaaaatacaagcgcaa
ttttcatcagctttgagttggaataaccaatatgaagacgcctgtccctggattctgggc
agaacaattcgaaatgttaaaaatggtccaagtcccgaatggttacagaaacgcttaaga
gctgttggaataagaccaatttcatgtttggttgatataaccaattattttgcctttgat
cttgggcgtccattgcatgtttatgatctggacaggattgcaggcaagcagctaacaata
tgtcgtggcaatggtgaaaaattcctggccttggatgagaaagaataccaagtcactgac
aaagattgtgtcatgatagatgaagccggtgttcaatccttggcaggattgatgggtggt
gaaaaaacaggtgtcagtgagaatacaacagatatctttcttgaatgcgctctttttgat
cctgttttgattgccttgagtggccgacgtcatatgatcgtgactgatgcgcgacagagg
tttgaacggggcgttgatcaggctttgttaccagatgcgatcgaattggctacgcaaatg
attatcaaattgtgtggggggcaggcaagcgatgtggttcatgcaggtcaagaacccaaa
tggcagcgtactgcaaccttgcattataatcgtttgaaagattacgggggattgacagta
tcggaaaatagggtttcggaaatactgaccaatcttggttttgtgattgcagaaaaaaat
tcggaatggataagggttgatgtaccttcatggcgtaatgatatcgcaatgcctatcaaa
atggcctataattccaagttggatgtggtaaaaaaagacagactgcttgattctgtaaga
gccctggagggtgaagcagatttggtggaagaaatattgcgtatagagggattggataaa
attcctgcctgttcaatgcctttgattcaacccgttccttcacctgcattgacaacagat
caggagcgttctattctttgttcccgtatgcttgctgcacaaggtctgatcgaaacagta
aatttttcatttgtagatcatgaaattgctgcacggttgggggaagcatctgaatcttta
cgtttaatgaatccaatttcaaatgatatggatcaattacggccgacccctctggcttcg
atcctgcctgttatgcagcgtaacatagcacggggtattggtgatattggacttttcgaa
actggtcctgcctttacacgaaatcaggaacgccttattgcagccggtgcacggtacgga
catatgcaacgtcaatatgatggtaaagcaccaaaagttactttatgggatgtaaaaaag
gatgttttaacggttctcgatggactgggcatttcaattgattctttaaaaacggttggt
gaaacaccgaattattatcatcctggacgctctggcaggttgagtttggggccaaaaaat
atattggcttattttggtgagttgcatccttccttgatgaaagaatttggttttgatcag
gctcccatgatttttgaaattatgcttgacacagtaattccaaagaagattaccaggaaa
aaggcacctgtactttcaatctttcaacccttaaagcgtgattttgcctttgttttaaaa
gacgggatccctgtcgagcagcttttacaggtcgttaaacaggctgatcgcaaatatata
aattcggttgaattgtttgatgtttatagaggagataaagttcaggcagatcataaatcc
gtcgctgttcaggtaactatccagccaaatgaccgaacattgaaagatgaggaaatagag
gcaatctcccaaaaaattatcaaggaagttgcacgtttgcttggtggaaatttaagataa
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