Commensalibacter melissae AMU001: D9V35_04555
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Entry
D9V35_04555 CDS
T05684
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq03030
DNA replication
coq03430
Mismatch repair
coq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D9V35_04555
03430 Mismatch repair
D9V35_04555
03440 Homologous recombination
D9V35_04555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coq03032
]
D9V35_04555
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_04555
Enzymes [BR:
coq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D9V35_04555
DNA replication proteins [BR:
coq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D9V35_04555
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D9V35_04555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AYN86812
LinkDB
All DBs
Position
complement(1007482..1008606)
Genome browser
AA seq
374 aa
AA seq
DB search
MKLKVDRTILLKALAHIQSVAEKRNTIPILANVLIEVQDGQMTLTATDMEIAIIETIQAE
SLENGAVTAPASVLYEIVRKLPDSAIIELTHTSIDMPLSLRAGKYATSLNVLDVEEFPSM
TSGDFPHNFQISTEVLRKLIEQTRFAISTEETRYYLNGIYFHITNSENENKLCAVATDGH
RLAKVECTMPEGAENIPGVIIPRKTIYEIYKLLEEAEEDIQIMLSDTRIQLNFGSVTLTS
KLIDGTFPEYERVIPKNNTKVLRVGKQDFATAVARVAAISMERSRPVKLSLDNNSLVLSA
SSVDQGNAKEELDGSQVQYESTPLEIGFQARYLNDITDQIDNQVEFILADNSAPTIVRDV
DDPSALYVLMPMRV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaggttgatcgtacaatattacttaaggccctggcgcatattcaaagtgtg
gctgaaaaacgtaatactattcccattcttgccaatgttttaattgaggttcaggatgga
caaatgacattaactgcgacagacatggaaatcgcaattattgaaaccattcaagcggaa
tcattggaaaatggcgctgttaccgcgccggcttcggttttatatgaaattgtacgcaag
ctgcctgacagtgccataatcgaactgacccatacaagtattgatatgccattatcgcta
agggcgggtaagtatgcaaccagcctgaatgttctagatgtagaagaatttccttccatg
acgtctggtgattttccccataattttcagatttcaactgaggtgctcagaaaacttatt
gaacagacaagatttgctatttcaactgaagaaacgcgctactatttaaacggcatatat
tttcatattacaaacagtgaaaacgaaaataaattatgcgctgtcgcaactgatggtcat
cgtcttgccaaggtcgaatgtacaatgcctgaaggtgcagaaaacatacctggtgtaata
atacctcgcaagactatatatgaaatatataaattgctggaagaagcggaagaagatatc
cagatcatgttatctgatactcgtattcagttaaattttggaagtgtcacattaacgtcc
aagttaattgatggtacatttccggaatatgaaagggtcattcccaaaaacaatacaaag
gttttacgggttggaaaacaagattttgctacagctgtggcaagagtggctgcaattagt
atggaaagatcccgtccagtcaaattgtctttggataacaattcccttgttttatctgcg
agcagcgttgaccaaggcaatgcaaaggaagaacttgacggttcacaagttcaatatgaa
tccacgccgttggaaattggatttcaagcacgatatttaaatgacataaccgaccagatt
gacaatcaggtagaatttattcttgctgacaattcagccccgacaattgttcgtgatgtt
gatgatccttctgcattatatgtattaatgccaatgcgggtttaa
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