Commensalibacter melissae AMU001: D9V35_05170
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Entry
D9V35_05170 CDS
T05684
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D9V35_05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_05170
Enzymes [BR:
coq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D9V35_05170
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D9V35_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND_NTPase5
DAP3
AAA_30
Flavi_DEAD
PF0610-like_N
Zn_ribbon_6
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
AYN87704
LinkDB
All DBs
Position
1139716..1141947
Genome browser
AA seq
743 aa
AA seq
DB search
MPLSYRKTVPVLLPYPFKEPFDYIIPHDLKVEKIIPGTLVIVPLNQRKEIGVVWQDHVLS
GNLSLSLTPTPKKEKRKLKEIISILPIQPLPRVLMQFIDWMANYNFTESGSVLAMAIRNI
RNLTVPLKKEYGWIKTSPLPTNLKITEKRKKILDFMNIPDQAYTTRELTENLHIKPSVIY
GLEKSGGIFKQPLTNFTQFSKPDPNFHQPNLSEEQTKATIFLRKQVDKKKFSVTLLQGIT
GSGKTEVYMQAIASCIEQNKQVLVLLPEIALSAQWTNRFYKRFGVNPALWHSDLGLKHRK
QTWMAILKNEVFVLVGARSALFLPFYDLGLIIVDEEHESSFKQEEGVIYNARDMAIVRAK
LSSCPIILVSATPSMETLINAHQGKYFHLTLTKRHGGAIMPRTELVDMKIHPPEKGHFLS
PPLVKATQEKLDKNEQVLFFLNRRGYAPLTLCRACGYRLECPHCSAWLVEHRSTRKLVCH
HCDYFIPVPLECPHCNTKNSLVPIGPGIERITEEARITFPDAKILVMSSDCLNSPKMTAE
AVRQIMRKEVNLIIGTQIVAKGWHFPDLTLVGVIDADLGLTGADLRAAEKTLQLLNQVGG
RAGRARFPGTVIIQSFLTDHPVMETLIKGDFNQFMIEEAHERKAGFWPPYGRLAAIIVSA
DTNQDALETAQELGLNAPSRDGVIVLGPAPAPLSLLRNRYRQRLLLRTHKSIAIQPILHQ
WLDPIKPKKNVKITVDIDPISFL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatcttaccgtaaaacagtcccggttcttctcccttacccattcaaggaacct
tttgattatataattccacacgacctaaaagtagaaaaaatcattcccggtaccctggtt
attgtaccgctcaatcaacgtaaggaaataggggttgtctggcaagatcacgttctatca
ggcaatttgtctttatcactcacccccacccccaaaaaagaaaaaagaaaattaaaagaa
attatttcgattttacccattcagcccctaccgagagttttaatgcaattcattgattgg
atggcaaattacaattttacggaatcaggttccgttctggcaatggcaatccgtaatatc
agaaatctcaccgttcccttaaaaaaagaatatgggtggataaaaacatcacctttgcca
acaaatttgaaaattaccgaaaaaagaaaaaaaattctggatttcatgaatattccagat
caagcctatacaacaagggaattgacagaaaatttacatataaaaccttcggttatttat
ggactggaaaaatcagggggcattttcaaacaaccccttaccaattttacgcaattttca
aaacctgatcccaattttcatcaacctaacctttccgaagaacaaaccaaagcaacaatt
tttttaagaaaacaagtagataagaaaaaattttctgtaactttactgcaaggcattacc
ggttcaggaaaaacagaagtttatatgcaagccatagcttcctgcatcgaacagaataaa
caagttctggttttattgccagaaatcgctttgtcagctcaatggaccaaccggttttac
aaacgttttggcgtaaatcctgcactatggcattccgatctaggtttgaaacaccgtaaa
caaacctggatggctatattaaaaaatgaagttttcgtgttagttggcgcgagatccgcc
ctatttctacctttttatgatctgggattgataattgtagacgaggaacacgaatcttcc
ttcaaacaggaggaaggtgttatctataatgccagggatatggccattgtcagggctaaa
ctatcctcgtgtcctattattttggtttccgccaccccttcaatggaaaccctgataaat
gcgcatcagggaaaatattttcatctcaccttaaccaaacgacatggtggggctatcatg
ccacgaaccgaactggttgacatgaaaatacatccaccagaaaaaggacatttcctgtca
ccacctcttgtaaaggcaacacaggaaaaacttgacaaaaacgaacaggtcttgtttttt
ttgaacaggcgcggttacgcccctttaactttatgccgtgcttgtggttaccgtcttgaa
tgtccacattgttcagcatggttggttgagcatcgcagcactagaaaactggtatgtcat
cattgcgattattttatacccgttccgctggaatgtccccattgcaataccaagaatagt
ctggttcccattggtcctggaattgaacgcattaccgaagaggcaagaattacctttcct
gacgcaaaaatccttgtcatgtccagtgactgtttaaacagccccaaaatgacagccgaa
gccgttcgccaaattatgcgaaaagaagtcaaccttattatcggcacccaaattgttgcc
aagggatggcatttccctgatcttactcttgttggggttatagatgccgatttgggatta
accggcgcagatttacgtgcggctgaaaaaacattacagttattgaatcaggtcgggggt
agagccggtcgagccagatttcccggtacagttataattcaaagttttttaacagatcat
cccgtaatggagacgttaatcaaaggtgatttcaatcaattcatgatcgaagaggcgcat
gagcgtaaagccggattttggcctccttacggtcgattggccgccataatcgtaagtgca
gatacaaatcaggatgctttggaaacagctcaagaactcggtctaaatgcacccagccga
gatggggtcatcgttttgggacctgccccagctcccctatctctgcttcgtaaccgttat
cgacagcgtttattgttaagaacacataaatccatcgccatacagccgatcctacatcaa
tggttggatccaattaaacccaaaaaaaacgtaaaaataaccgtggatatcgatccaata
tcgtttttgtaa
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