Commensalibacter melissae AMU001: D9V35_05360
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Entry
D9V35_05360 CDS
T05684
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq02024
Quorum sensing
coq03060
Protein export
coq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
D9V35_05360 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
D9V35_05360 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D9V35_05360 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
coq02044
]
D9V35_05360 (secD)
Secretion system [BR:
coq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
D9V35_05360 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
ACR_tran
MMPL
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
AYN86962
LinkDB
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Position
1183101..1184654
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AA seq
517 aa
AA seq
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MMYYSRTKLALVFATCFMGLLLCLPNFVKHPSFKIPWHQIHLGLDLKGGSYLLMQVDVET
ISINRLQTLSDNVRQTLISKNLGYRNLHMVPKDHTIVFNLRDPREKEGVLSALRSMPKAV
PNEFEVSNNNDQIRMKLSTDAMQHRASEAVTQSIEIVRKRIDATGAVDPSITRQGTDRII
VQLPGVSDPNRIKQLLGTTAKMTFHLLDENANPNLPPPGVTFLPTAGNENEKLPIRDHIE
VDGADLTGASAGFDQQSGEYAVNFSFDNAGAQSFANVTRANINKRFAIVLDNKVIEAPVI
RTPITGGNGQITGGFDAQKATDLALLLRAGALPAPLKVMEERSIGPSLGADAIRAGGLSL
VSGFVLVIIFMLLFYGRFGLYANIALFANLVLMSAILSLFEATLTLPGMAGMLLTLGMAV
DANILINERIREETRNGRTPLNALQTGFDRALNTIIDSNVTAFIAHVMLFIFGTGAVKGF
ALTITIGIVTTLFTTLCLSWMLTIRWYAVTRPKELPI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattacagtcgaacaaaacttgccctggttttcgccacttgtttcatggggcta
ttattatgtttacccaattttgttaaacatccatcttttaagataccttggcatcagatc
catcttggccttgatttaaaaggaggatcctatttactgatgcaggtggatgtggagacc
atcagcataaaccgtttacagacgttgagtgacaatgttcggcaaacccttatttccaaa
aatctgggttatcgcaatttacatatggttcccaaagatcataccattgtttttaatttg
cgtgatccacgtgaaaaagagggtgttttatctgcattgagatcaatgccaaaagcggtt
cccaatgaatttgaggttagtaataacaatgatcaaattagaatgaaactttcaactgat
gcaatgcagcaccgcgcaagcgaggcggtaactcaatccattgaaattgttcgcaaacgt
atcgatgcaacaggtgctgtcgatccatccataacccgtcagggtacagacagaatcatt
gttcagctaccgggcgtcagtgatccgaaccggattaagcaattacttggtacaacagct
aaaatgacatttcacttattggatgaaaatgcaaacccaaacctacctccacccggtgta
acatttctcccaacagctggaaatgaaaatgaaaaattaccaatacgtgatcatattgaa
gttgacggtgccgacctaacaggagcaagtgctggatttgatcagcaaagtggcgaatat
gcagtaaatttcagttttgacaatgcaggcgcacaatctttcgcaaatgttacccgtgcc
aatatcaacaaacgtttcgctatagtgttggataataaggttatagaggcacctgtcatt
cggactccaatcacaggcgggaatggtcaaattacaggcggatttgatgcgcaaaaagcc
actgatcttgccttacttttacgagcaggtgccttgcctgctccgctaaaagtgatggaa
gaacgttcaattggtccatcactgggggctgatgctatcagggctggaggattgagtctg
gtaagcggttttgtccttgtgattatttttatgcttctattttatggtcgttttggtctc
tatgcgaacatcgctttatttgcaaatctcgtattaatgagtgccattttatctcttttc
gaagcgacgctaaccttgccaggtatggcgggaatgcttctaacccttggaatggcagtt
gacgcaaatattcttatcaatgaacgcattcgcgaagaaacacgtaatggccgtacgccc
cttaacgctttacaaactggatttgatcgtgctctcaatacaatcatcgacagtaacgtc
accgctttcattgcacacgtcatgttattcatatttggaacgggtgcggtcaagggattt
gcattgactatcaccattggtattgttacgacccttttcaccaccttatgcctctcctgg
atgctgacaattcgctggtatgctgtcacccgccctaaagaacttccgatttga
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