Commensalibacter melissae AMU001: D9V35_05415
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Entry
D9V35_05415 CDS
T05684
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq00300
Lysine biosynthesis
coq00470
D-Amino acid metabolism
coq01100
Metabolic pathways
coq01110
Biosynthesis of secondary metabolites
coq01120
Microbial metabolism in diverse environments
coq01230
Biosynthesis of amino acids
Module
coq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D9V35_05415 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D9V35_05415 (lysA)
Enzymes [BR:
coq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D9V35_05415 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TPR_11
Motif
Other DBs
NCBI-ProteinID:
AYN86971
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Position
1192650..1193975
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AA seq
441 aa
AA seq
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MSSSKTEPETNYQTLLQTHPDFIIDEKKGLCFGKVPLQSLTDHYGSPVWVINADILTSRF
QKLSRAFLQNKMDFSIHYAVKANDHLAILDLLAKEGAGVDIVSLGELRRALKVNINPRKI
CFSGVGKTEEELKAAIQLEIGQINVESREELHLISKIAMDTGKKAAICLRVNPDVDARTH
HKITTGLAENKFGIAYEQALQVYKEASQLDNILPLGFDVHIGSQISSVEPYKKAFLKMGK
LVKQARKEGLEVSVLDCGGGFGISYYDEKESDPYALANLMQEIFSSLNIRICIEPGRWLV
GPAGILISKVIRRKNNGPEAAPFIILDAAMNDLLRPAMYDAWHGILPIQAEIYKRPLEKQ
NIDGPICESSDIFARQRLLPQLRENDEIAILDAGAYGHVMSSSYNARPQALQLMIKDKRL
FVIKPRQTFESLWNNETIPNG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttctaaaaccgaacctgaaacaaattatcaaacccttttacaaacgcatcca
gactttattattgatgaaaagaaggggctctgttttggtaaagttccacttcaatctctt
actgatcattatggtagtcctgtatgggtaatcaatgcagatatattaacatcacgtttt
caaaaactttctagagcatttctgcaaaacaaaatggacttttctattcattatgccgtg
aaagcaaatgatcatctggccatacttgatcttttggcaaaagaaggagcgggagttgac
attgtcagtctgggtgaattaaggagagcactaaaagtcaatatcaacccacgaaaaatt
tgtttttcaggagtgggaaaaacagaggaagaattaaaagccgccattcaattagaaata
ggccaaatcaatgttgagagccgtgaagagcttcatcttatttctaaaatagcaatggat
acaggaaaaaaagccgcaatttgtttaagagtcaatcctgatgtcgatgccagaacgcat
cataaaattactacaggtttggcggaaaacaaatttggtatcgcttatgagcaagctctt
caggtttacaaagaagcaagccaactggataatattctcccattgggatttgatgtccat
attggtagtcagatttcatctgtagagccctataaaaaagcttttttaaaaatgggaaaa
cttgttaaacaagcacgtaaagaaggattagaggtctctgttctagactgtggaggtggt
tttggcatttcttactatgacgaaaaagagtccgacccatatgctctagctaatttaatg
caagaaattttctcttcccttaatatccgtatttgtattgaacctggccgctggctggtt
ggtccggcaggcatcctgatcagcaaagttatcagaagaaaaaacaatgggccagaggca
gcccctttcattattcttgatgctgccatgaacgaccttttgcgtccagcgatgtacgat
gcgtggcacggtatcttacctatacaggctgaaatatataagcgtcccttggaaaaacag
aatattgacggtccaatatgcgaatcaagtgatatttttgctcgccaacggttacttccc
caattaagggaaaatgatgaaattgccattctggatgccggtgcctatggacacgtcatg
agttcctcttataatgcccgtccccaagctttacaattgatgatcaaggataaaagatta
tttgttatcaaaccacgtcaaacatttgaatccttatggaataatgaaactatacccaac
ggataa
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