Commensalibacter melissae AMU001: D9V35_05485
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Entry
D9V35_05485 CDS
T05684
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
coq
Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coq03016
]
D9V35_05485 (truA)
Enzymes [BR:
coq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D9V35_05485 (truA)
Transfer RNA biogenesis [BR:
coq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D9V35_05485 (truA)
Prokaryotic type
D9V35_05485 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF5118
Motif
Other DBs
NCBI-ProteinID:
AYN86983
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All DBs
Position
1205611..1206390
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AA seq
259 aa
AA seq
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MNFTIQRWAVKIEYDGTGLVGWQRQDNGLSVQQILEEAACKLCNGQFKIASITAGRTDAG
VHALGQVAHLDFPAHIPLTAKKIRDGLNYYMKPHAVTILQSGLVDAEWNARFSAIKRKYI
YVILNRQSRPALDINHVWHVRKKLNVDAMNEAAQTLLGSHDFTSFRATACQAKSPIRILD
KFNVYQIDDKIYFETQARSFLHHQVRNMVGTLKMIGDGYWPIKQAYAILQGRDRKLAGIK
APATGLFLKEITYPDDPFQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaccatacagagatgggccgtcaaaatcgaatatgatggtacaggtcttgtt
ggatggcaacggcaggataacggcctttctgttcagcaaatattagaagaggctgcctgc
aaactatgcaacggtcaatttaaaatagccagcattaccgccggtcggacagatgccggt
gttcatgccttgggacaagtggcccatcttgattttccggcacatatacccttaacagcc
aaaaaaattcgcgatggcttaaattactatatgaaacctcatgccgttacaatcttgcaa
tcagggctggttgatgcagaatggaatgcacgtttttctgcaataaaacgaaaatatatt
tatgtcattctcaaccgtcagagccgtcctgctttggatattaatcatgtatggcatgta
cgaaagaaattaaatgtcgatgctatgaacgaagctgctcaaaccttattgggaagccat
gattttacatcattcagagctactgcatgtcaggcaaagtcaccaatccgtattttggac
aaatttaacgtttatcaaattgatgataaaatttattttgaaacacaggcccgttcattt
ttacatcatcaagtacgtaatatggtaggaacccttaaaatgattggagacggatattgg
ccaataaaacaggcctatgcaattttacagggtagagatagaaaattggcaggaatcaaa
gctcctgcaacaggtttgttcctcaaggaaataacctatccggatgacccttttcagtga
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