Commensalibacter melissae AMU001: D9V35_05645
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Entry
D9V35_05645 CDS
T05684
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D9V35_05645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_05645
Enzymes [BR:
coq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D9V35_05645
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D9V35_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AYN87012
LinkDB
All DBs
Position
1233833..1234468
Genome browser
AA seq
211 aa
AA seq
DB search
MINLTPDINCSICPRLKNFREENKEKFPTGWNAPVPTWGNIDSELLIVGLAPGLKGANLT
GRPFTGDYAGILLYNTLIKYKFASGTYQADPNDGLTLINCKILNAVRCVPPQNKPTTQEE
KNCRPYLKSAIENMMNLKIILALGVIAHNNILSCFNISNSKVKFKHGQYIQLNEKISLVD
SYHVSKYNTSTRLLTTEMFENLIESIHVKLD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgataaatttaacacctgacataaattgtagcatttgtcctcgtcttaaaaattttaga
gaagaaaataaagaaaaatttcctacaggctggaatgcacctgttccaacctgggggaat
attgattcagaattacttattgttggtctagctccgggattaaaaggggcaaacttgacc
gggcgtcctttcacgggagattatgcaggcattttactctacaatactcttatcaaatac
aaatttgcctctggaacttatcaggctgatcccaatgatggtttgaccctgatcaattgt
aaaatcttgaatgccgttcgttgcgtaccacctcaaaataaacccacaacgcaagaggaa
aaaaactgtcgcccttatttgaaatcagcaattgaaaatatgatgaatttaaaaattatt
ttggcgttgggtgtaattgcacataacaatattttgtcatgttttaacatttcgaattct
aaagtgaaattcaagcatggacaatatattcaactaaatgaaaaaatatcgctggtcgac
agctatcatgtatcaaaatataatacgagtaccagattattaacaacggaaatgtttgaa
aatttaatagaatctattcacgtcaaacttgattag
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