Commensalibacter melissae AMU001: D9V35_07575
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Entry
D9V35_07575 CDS
T05684
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq00300
Lysine biosynthesis
coq00470
D-Amino acid metabolism
coq01100
Metabolic pathways
coq01110
Biosynthesis of secondary metabolites
coq01120
Microbial metabolism in diverse environments
coq01230
Biosynthesis of amino acids
Module
coq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D9V35_07575
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D9V35_07575
Enzymes [BR:
coq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
D9V35_07575
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AYN87360
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Position
complement(1672664..1673488)
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AA seq
274 aa
AA seq
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MDISFSKMHGIGNDFVIIDNSVNRIQLNNNRIAELCDRRYGIGCDQLIILSAPKDKKADV
YVRFFNPGGDEAGACGNGSRCVTAWLHDKFQRKNFTLQTSAGLLPTEVIDAFTVKVNMGQ
PKMNWRDIPLQRDVDSLYLPLSGEPAAVSMGNPHVTFFVEDLSTVDPVFCGQVLEKDPLF
PEGANIGFVQMLDRQNMRVRVWERGAGLTLACGSGACASVVNAVRRGLADRYCEVRMDGG
NLIVEWDEASNDVLMTGPVHFSFTGQFNLDHYPL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcttttagtaaaatgcatggtatcggtaatgattttgtcattatcgataat
tctgtcaacagaattcagctaaataataatcgtattgccgaactatgtgatcgtcgttat
gggattggctgtgaccagttgattatattatctgctccaaaagataaaaaagccgatgtt
tatgttcgttttttcaatcctggtggtgatgaggccggtgcctgtggaaacggttcacgc
tgtgtcacggcatggttacatgataaatttcaacgtaagaattttaccttacaaaccagc
gctgggttactgccaaccgaggtcattgatgcttttacagtaaaagtaaatatgggacag
ccaaaaatgaattggcgtgatattccactacaacgtgatgttgatagtttatatttgcca
ttatccggggaaccggcagcggtttctatgggaaatccccatgtaacatttttcgttgag
gacttatctacggtcgatcctgtattttgcggtcaggttctggaaaaagaccccttgttt
ccggaaggggcaaatatagggtttgtacagatgctggatcgtcaaaacatgcgggttcgt
gtttgggaacgcggggcagggttaacactggcttgtggttccggtgcatgtgcttctgtt
gtgaatgcggttcggcgaggtttggctgatcgttattgcgaggtaagaatggatggtggg
aatttgattgttgaatgggatgaagcctctaatgatgtattgatgacaggtcctgttcat
ttttcttttaccgggcaatttaatttggatcattaccctttatga
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