Commensalibacter melissae AMU001: D9V35_07860
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Entry
D9V35_07860 CDS
T05684
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
coq
Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_07860 (addB)
Enzymes [BR:
coq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D9V35_07860 (addB)
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D9V35_07860 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AYN87413
LinkDB
All DBs
Position
complement(1738208..1741249)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSKYITIPFNAVFLDTIAQKWMEEMHSQGGYPCGMVIVPNQRTVKALINSFIKVNKGKPL
LLPKIISIGTIDEAGLSFNSKEELTLFPAVHPVKRLSILTSLIIQMNHKLGNQIQAGEAW
NLAKSLADLMDEAEWIGCDLKTALSKAVEDEYAQHWQNILKFLSIITEIWPQWLQDNQLM
NPVARVIALLKAQAKSWRNSGCQDPVWVVGFADARPVIVEFLSTVVQLPRGRLIVSGLQE
DLSEESWNALPITHPYAELVKMFLALGIKRSDFQYWDHICVQPICKERISAFQQILLPAD
RLESWLINRRPVQLDQCFLIEPLNQQQEAIAIALMIRDALEIPQKRIALVTPDRNLAMRV
SLELGRWGVIADDSAGEPLYKTAGTVFLNLILQACVEDFTPLSLLSLLKHPFACCGLPAS
LCRDYSRLLEIFILRQFAASGLSVIQAALKQKIEEIKLLDKDTLRTDIAYFFSNSSELVS
LLDRLKQNVQTLLGKTTKYTVGEWVTYLARAAEQLASNQEQNGEDILWKAEEGNVLAEHL
RDLIVETEYIKVVTLSEFASIFRASFQGLIVHTRRALQGREVRQLHPRVYIWGLLEARLQ
NVDMVILGGLSEGVWPPSIDSGSWLSRPMREKMGMGLPDIEIGRTAYAFMALCCSIPEVI
LSSPLRQENAPVVQSRWIVRLKAWLKGRKSVIQQHPALMWTKYLDQPDGSPTPMECPSPK
PLPALRPKSISITDVERWIKDPYEIYAKKILNLRKIVGLEEDRSTSIFGLIVHEGLKNVY
ENYSKQWTLSGIEQTLLDALDKRQDILISYKKWWHARLLKIAHWVYQQEKSRRNSRMLPQ
FYLEKEGHHYFQLTAGIDFTLRGIADRIQLNTDGTVEIYDYKTGVTPACINVKNGLFPQL
PLEAAMAYYGGFDKSLAEHEISKFTYWELKGGIEEGKEIHIDNIQKEGDATNLSERYWQV
LQKLIIAYCDQEQPYLSCPRPHLIKEYVQTLPVFGDYKHLARFLEWGLGTGGS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatatatcacgatcccctttaatgcagtatttttggatacgattgctcaaaaa
tggatggaggagatgcattctcaagggggttacccgtgtggaatggttattgttcccaat
cagagaaccgtaaaagcgttaattaatagttttattaaagttaataaagggaaaccgctg
cttttacccaaaattatttccattggcactatagatgaggcaggattatcttttaatagc
aaagaggaactgacactttttcccgcagttcatcctgtaaaaagattatcaattctgaca
tcgttaattatacaaatgaatcataagcttggtaatcaaattcaggctggtgaagcttgg
aatttggctaaatccctggctgatttaatggatgaggcggaatggattggatgtgattta
aaaacggctttatcaaaagcggttgaggatgaatatgcacagcactggcaaaatattcta
aaatttctatcaattataaccgagatatggcctcaatggttacaggataatcaattgatg
aatcccgtagcaagggtaatagctcttttaaaagcccaggctaaaagttggcggaattct
ggatgccaggatccagtttgggtggtcggatttgcagatgcaaggcccgttattgttgaa
tttctgtccacggttgttcaattgccacgcggacgtttgattgtttccgggttacaggag
gatttgtcagaggaaagctggaatgctttgcctatcacgcatccctatgccgaacttgtc
aaaatgtttttggcattaggtattaagcgttctgattttcaatactgggatcatatatgt
gttcaaccaatttgtaaggagcgtatatcagcatttcagcaaattttattacctgctgac
cgtttggaaagctggttaataaatcggcgtcctgtacaattggatcaatgttttttaatt
gaaccgctcaatcagcagcaagaggcaatagccattgcgttaatgattcgagatgctttg
gaaattccacagaaaagaattgcacttgttacgcctgatcgtaatttggcaatgcgtgtt
tctctggaattgggacggtggggggttatcgcggatgatagtgctggtgaaccgctttat
aaaacggccggcacagtttttttaaatttgattttacaagcttgtgtcgaggattttacc
cctttatctttattatccttacttaaacatccatttgcttgttgtggattgcctgccagt
ttatgccgtgattatagccgtttgctggagatctttattctaagacaatttgcagcttct
ggtttatcagtcattcaagcagcattgaagcagaaaatcgaagaaattaagctgttagat
aaggataccctaagaaccgatatcgcatattttttttccaactcatctgaattggtcagc
ttgctggatcgattgaaacagaatgtgcaaactctgttgggaaaaactacaaaatatacg
gttggcgaatgggtgacgtatttggcaagagctgcggaacagcttgcctctaatcaagaa
cagaatggagaggatattctatggaaggctgaagagggaaatgtacttgccgagcattta
agagatcttattgttgaaactgaatatataaaggtggttactttatctgaatttgccagt
attttcagggcatcgtttcaaggattaattgttcacacgcgccgtgccctacaagggaga
gaagttagacagcttcatccaagggtatatatctggggattgcttgaagcacggttgcag
aatgttgatatggtaattttagggggattatccgaaggggtatggccaccctccattgat
tctggttcttggctaagccgcccgatgcgtgaaaaaatggggatgggactgccggatatt
gaaataggtcgtacagcctatgcttttatggctttgtgttgttcgataccagaagtgatt
ttgtcttcaccgttaagacaggaaaatgcgccagttgtgcaatcgcgttggattgtccgt
cttaaggcgtggttgaaggggcgcaagagtgtaattcagcagcatccggctttgatgtgg
acaaaatatcttgatcaaccagatggatctccaaccccaatggaatgtccttctccgaaa
cctttgccggcattgcgtccaaaatccatttccataactgatgttgagcgatggataaag
gatccttatgagatttatgcgaaaaaaatacttaatttaagaaaaattgttggtttggag
gaagatcgatcaaccagtatttttgggttgatagttcatgaagggttaaagaatgtttat
gaaaattatagcaaacaatggacgctaagcggaatagagcagactcttttggatgcactg
gataaacgtcaggatatcttaatttcttataaaaaatggtggcatgcacggttattaaaa
attgcccattgggtttaccaacaggaaaagtcacgtcgtaacagtcgaatgcttcctcag
ttttatcttgaaaaagaaggccatcattattttcagttgaccgcaggaattgacttcacc
ttacggggtattgcggatcgaatacagctaaacacggatggaactgtagaaatatatgat
tacaaaacaggtgttacccctgcgtgtataaatgtgaagaacggattgtttccgcagtta
cccttggaagcggcaatggcttattatggcgggtttgataaaagtctggctgaacatgaa
atttctaaatttacatattgggagttaaaggggggaatagaagaaggtaaggaaatccat
atagataatattcaaaaagaaggggatgccacaaatttaagcgaaagatactggcaagtt
ctgcaaaagctaattattgcctattgtgaccaggaacagccttatttatcttgtccacgt
cctcatttaataaaagaatatgtacaaaccctgcctgtttttggagattataagcatttg
gctcgttttcttgaatggggactgggaactgggggatcatga
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