Commensalibacter melissae AMU001: D9V35_08395
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Entry
D9V35_08395 CDS
T05684
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D9V35_08395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coq03400
]
D9V35_08395
Enzymes [BR:
coq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
D9V35_08395
DNA repair and recombination proteins [BR:
coq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D9V35_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AYN87502
LinkDB
All DBs
Position
complement(1846760..1848211)
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AA seq
483 aa
AA seq
DB search
MSIDEQLSDRMTDNIPEFSVGDISTAIKRVLEGNFSRIKVRGEITELKQYPSGHIYFSLK
DENGKLTAIIWRFKAAKLTIKLENGIEVIATGKISSYGERSSYQLIVDQIDYAGEGALLA
RIEKLRKRLEAEGLFDQEKKRPFPLLPKVIGVITSSKGAVLHDIRTTIQRRFPRDILVWP
VAVQGEGASEQIVRAIIGFNTLSVNGKIPRPDILIVARGGGSLEDLMAFNDEAVVRAAAE
SKIPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPSQVDLAAGIMQLVTRLNKALIQ
VIQSYQLRLNKAITRLPDVPTLLAQNRMRLDDRSYRLDLALPALVLKRRHQLSSIQAVDQ
YLLGLIDRFKRQLAFNEKQYAISWLHYMRQLENNLPLFSISNVRNLLRERQLKLESVTAR
LEALSPKAVLARGYVLVQNKKGQAVTEARGLRAGSDLILTFYDGQKDVRVLKRQENRQES
FDL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagatgagcaactttctgatcgaatgacggataatataccagaatttagtgta
ggggatatttctacagcgattaagcgagttttggaaggaaatttttctcggattaaagtg
aggggggaaattaccgagttaaaacagtatccgtctggacatatttatttttccctaaaa
gatgaaaatggaaaactgacagcaattatctggcggttcaaggcggcaaaacttactata
aaactcgaaaacggtattgaggttattgcaacaggcaagatttcttcttatggggaacgt
tcatcatatcagcttattgttgatcagattgattatgccggcgaaggggctttattggcc
cgtatcgaaaaattaagaaagagattggaagctgaaggtttatttgaccaggaaaaaaag
cgtccttttcctctattgccaaaagtaataggtgtgattacatcctctaaaggcgcggtt
ttgcacgatattcgcacaacaattcaacgacgttttcccagggatatcctggtctggcca
gtggcggttcagggagagggggcaagtgaacagattgtcagggctattattggatttaac
accctttctgttaatggtaaaattccacgtcctgatatcttgattgttgcacgagggggt
ggatcactggaagacttgatggcctttaatgatgaggctgttgtaagggccgcagcagag
tcgaaaattcccctgatctcagcagttggacatgaaacagatacaaccttgattgatttc
gcatctgaccgtcgggccccgactccaactgcagctgcggaaatggctgttccttcgcag
gttgatcttgctgctggaataatgcagctggttacgcgtttgaataaagcattaatacag
gttattcaatcttatcaactgcgtttgaacaaggccattaccagattgccggacgttccc
actctattggcgcaaaaccgtatgcgcctggatgaccgttcctatcgtctggatttggcg
cttccagcattggttctgaaaaggagacatcagctttcttccattcaggctgttgatcaa
tatcttttgggactgattgatcgtttcaagagacaactggcctttaatgaaaaacaatat
gcaatttcttggctgcattacatgcgtcagctggaaaataatttacccctgttctccata
tcgaatgtacgtaatttattgagagaaaggcagctgaaattggaaagtgtcacggcaaga
ttggaagccctttcccccaaggctgtattggcacggggatatgtcttggtacagaataag
aaaggtcaggctgtaactgaagcaagaggattgagggctggatctgatttgatcttaact
ttttatgatgggcagaaagacgtgcgtgttttgaagcggcaggaaaaccgtcaggaaagt
tttgatctgtaa
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