KEGG   Commensalibacter melissae AMU001: D9V35_08430
Entry
D9V35_08430       CDS       T05684                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
coq  Commensalibacter melissae AMU001
Brite
KEGG Orthology (KO) [BR:coq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:coq03016]
    D9V35_08430 (truB)
Enzymes [BR:coq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     D9V35_08430 (truB)
Transfer RNA biogenesis [BR:coq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    D9V35_08430 (truB)
 Prokaryotic type
    D9V35_08430 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C TruB-C_2
Other DBs
NCBI-ProteinID: AYN87509
LinkDB
Position
complement(1857069..1857995)
AA seq 308 aa
MHTKRKQKLDGWLLVDKPLNVTSAYVVNRVKYAFNACKVGHSGTLDPLATGLLPIAFGQA
TKTIPYIMDKTKVYHFELTFGESRTTDDAEGEVLDHSEFRPGDEQINKALQSFQGEIYQV
PPIYSAVKVQGRRSYDLARQGEKPQLKERLARIDSFRMIERIDKDRAKFEVVSGKGVYMR
SLARDLAVACNTVGYVSELRRLRVGPFDIANAFLLDKLVENGKKGIVSLDMLLPVQTALD
DIPALAMTEEEAESLNFGKSIDLTEIRNRFALDVNSYDGIVRAMKKEHFIGLCHLNNKWL
RPVRIFNI
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcatacaaaacgtaaacagaagttggatggatggcttcttgttgataaaccattaaat
gtgacatctgcttacgttgtaaatagggtgaaatatgcttttaatgcctgtaaggtaggg
catagtggtaccttggatccattggcgacagggttgttacccatcgcttttggccaggca
accaaaacaatcccttacattatggataagacaaaagtttatcattttgaacttactttt
ggagaatctcgtacaacggatgatgctgaaggtgaggttcttgaccattcagagttcaga
ccgggtgatgaacaaatcaataaggctttacagtcctttcaaggagaaatatatcaggta
cctcctatttactcagcggtaaaggtgcaaggtagacgttcttatgacttagcacgtcaa
ggggaaaaacctcaactaaaagaacggttggcacgtattgattcttttcgaatgatagaa
cggattgataaagatcgtgcaaagtttgaagttgtttctggtaaaggcgtttatatgcgt
tctttagccagggatttggcggttgcctgtaatacagttggttatgtttctgaattacgc
cgccttcgcgtgggtccatttgatattgcaaatgcttttttactggacaaactcgttgaa
aatggcaaaaaaggaattgtttctttagatatgcttcttcccgttcaaactgcgctggac
gacatcccggctctagctatgactgaagaggaggctgaatccctgaattttggcaaatct
attgatctgaccgagatacggaatcgttttgcactggatgtgaattcatatgatggcatt
gttcgtgcaatgaaaaaggagcattttataggattgtgccatttaaacaataaatggctg
cgtcctgttcgtatttttaatatttaa

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