Corynebacterium pseudotuberculosis 267: Cp267_0871
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Entry
Cp267_0871 CDS
T01934
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cor
Corynebacterium pseudotuberculosis 267
Pathway
cor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cp267_0871 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cor03021
]
Cp267_0871 (rho)
03019 Messenger RNA biogenesis [BR:
cor03019
]
Cp267_0871 (rho)
Transcription machinery [BR:
cor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cp267_0871 (rho)
Messenger RNA biogenesis [BR:
cor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cp267_0871 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFH51773
LinkDB
All DBs
Position
889925..892111
Genome browser
AA seq
728 aa
AA seq
DB search
MTSFTSGKGDERTSVTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAING
YKGGKAAQSGHSAAPAAKRNARAQAAPKAEKDSAPVENSVPEVSKEQQEKADQVPAKESK
SRRRRVLKTTGTMDSTHETASSEPISQESSPAEEEKPRRRRVTRRVEVSSEKRDPAENSP
QDKTDTPSESNDGVARVSENGDAEDENRYESRSAARRARRNRARREHREDRQTSQREDNH
AEGDRSSNDEEQRKEASVDNVKATGRREASEQQAADQPQTRETREGSENEHPRQRNGRHH
ERGERGDRNRRNRRNRRGRDRDDHRDNSNIEPREDEVLQNIAGILDIVDSNVAFVRTSGY
HAGSADVYVNNQMIRRLGLRAGDAITGQVRMNGDNNHGGHHGHNRGRNRQKYNPLVRVES
VNGMSVEEAKARPDFSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPK
AGKTTILQNIANAIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTA
VAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFL
GAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVN
PSGTRKDELLLVPEEARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNGEFLMQIASSAP
MAADAEEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcttttacctctggtaaaggcgatgaaaggacatctgtgacaacaacagataac
ggcgcacagcgtaatcttgctgcattgcgtctgcccgagctgcgtaagatcgccgctgaa
atgggtctaaaaggcacctctgcattgcgcaaaggtgatcttatcgccgccattaacggc
tataaggggggaaaagctgcacagagcgggcatagtgccgcgcctgcagcaaagcgtaat
gctcgagcacaggctgcccccaaagcagagaaagactctgcacctgtagaaaactcggtt
ccagaagtatctaaggaacaacaagaaaaagctgaccaggttccagctaaggagtccaag
tcgcgtcgccgtcgcgttctgaagaccacaggaaccatggattcaactcatgaaacagct
tccagtgagcctatttcacaggaatcctcgccagcagaggaagaaaagccacggcgacgc
cgtgtgactcgtcgcgtagaagtttcttcggagaagcgcgaccctgcagagaattctccg
caggataaaacggatacgcccagcgaatcgaatgatggtgtagcacgagtttccgagaat
ggcgatgcagaggatgaaaatcgctatgagtcgcgttcggctgctcgacgtgctcggcgt
aatcgtgctcgtcgggaacaccgtgaagaccgtcagacgtctcagcgcgaggacaatcac
gctgagggcgatcgatcttctaacgatgaggaacagcgcaaagaagcatccgttgataac
gtgaaggcaacggggcgtcgagaagcctctgaacagcaggctgcagatcagccgcaaact
cgggaaactcgtgagggctctgaaaatgagcatcctcgtcagcgcaatggccgtcaccat
gagcgtggcgagcgtggggatcgtaaccgtcgtaaccgccgtaatcgtcggggtcgtgac
cgcgacgatcatcgggataactccaacattgagccccgtgaagacgaggttttgcagaac
atcgccggcatcctcgacattgtggatagcaatgtcgctttcgtgcggacctcgggctat
catgcaggctctgcagatgtctacgttaacaaccagatgattcgtcgtttgggtttacgt
gctggcgatgccatcaccggacaggttcggatgaacggcgataacaaccatggcgggcat
catgggcataatcgtggacgcaaccgccaaaagtacaatccgttggttcgcgttgaatct
gtcaacggcatgtccgtagaagaagctaaggctcgtccggacttttctaagctcactccg
ctgtacccgaaccagcgactgcgtttggaaacagagccgaagatccttaccactcgtgtg
atcgacttgattatgcctatcggcaaaggccagcgtgcgcttatcgtgtctccgccaaaa
gctggtaagactacgattttgcaaaacatcgctaatgccatcgccacgaataatcccgag
tgctatttgatggtggtgcttgtcgacgagcgccctgaagaagtcaccgacatgcagcgc
tccgtcaagggtgaggttattgcctctaccttcgaccgtccgccaagcgagcacactgct
gtagccgagttggcaatcgagcgtgctaaacgactcgtagaacaaggacaagacgttgtg
gtgcttctagattccatcactcgccttggccgcgcttataacaactcttcgcctgcttca
ggtcgtatcctgtccggtggcgtggattcgaacgccctctatcctccaaagcgcttcctg
ggtgcggctcgtaacatcgaaaatggtggttcgctgaccatcattgctactgcaatggta
gaaactggttctgcaggcgacaccgtgatctttgaggagtttaagggcaccggcaacgca
gagctcaaactggaccgtaagatctccgagcgtcgagtattccccgcagtagacgttaac
ccgtcaggaactcgtaaggacgagctgcttttggttcctgaagaagctcgcatcatgcat
aagttgcgcaggattctcgcagccttggacaaccaacaggccatcgacttacttattaag
cagcttaagaagaccaaatctaatggtgagttcttgatgcagatcgcttcaagtgcgccg
atggctgcagacgccgaggaggagtaa
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