Chryseobacterium oranimense: N0B40_00685
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Entry
N0B40_00685 CDS
T08904
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cora
Chryseobacterium oranimense
Brite
KEGG Orthology (KO) [BR:
cora00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cora03009
]
N0B40_00685 (rimO)
Enzymes [BR:
cora01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N0B40_00685 (rimO)
Ribosome biogenesis [BR:
cora03009
]
Prokaryotic type
ribosomal protein modification factors
N0B40_00685 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UWX60798
LinkDB
All DBs
Position
129681..130982
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVDAKNRGEVEKVFVTGCLSERYKPDLIKEIPDVDQYFGTRDLPVLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVLEAQKLA
KKGTKEIILIAQDLTYYGLDLYKKRALGELLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTNALLAKFREKVPDMAVRTTLIVGYP
GETEERFQELKDWVREQKFDRLGCFTYSHEENTGAYVLEDDIPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKVFRCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAEETYISIGEFADVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaatctgtagggaagaagaaaatcaatgttgttactcttggatgttccaag
aacgtatacgattctgaagtattaatgagccagcttaaagctaatggaaaagaagtggtt
catgaagaccgcggagatattgtagtaatcaatacttgtgggtttattgacaatgctaaa
gaagaatctatcaacactatccttgattatgtagatgcaaaaaacagaggtgaggtcgag
aaagtttttgttacaggctgtctttctgaaagatacaagccggatcttattaaagaaatc
ccggatgtggaccagtactttggaacaagagaccttccggttcttcttaaacatcttgga
gctgactataagcatgagcttgtaggtgagaggttaactactactccaaaacactacgca
taccttaaaatttcagaaggatgcgaccgtccttgttctttctgtgctatacctttaatg
agaggcggacatgtttctacccctattgaaaaactggttttggaagctcaaaaactggca
aaaaaaggaacaaaggagattatccttattgcccaggaccttacttattatggtcttgat
ctttataaaaaacgtgctcttggagaacttttaaaagagcttgtaaaagttgaaggtata
gagtggattcgtcttcattatgctttcccaagcggtttccctgaagatgttcttgatatc
atccgtgaagaaccgaaagtgtgtaattatatcgatattcctcttcagcatatcaactct
gatcttttaaaatccatgaaacgtggaactactcatgaaaaaacgaatgcattgttagct
aagtttagagaaaaagttccggatatggccgttagaactactttaatcgttggatatccg
ggagaaaccgaagaaagatttcaggaattaaaagattgggtaagagagcaaaaatttgac
agattgggatgttttacttattctcatgaagaaaacacaggggcctacgtgttggaagat
gatataccacaggaggtaaaagaagcaagagtggaagagatcatggaacttcagtcacag
atttcctgggaaaagaatcaggagaagatcggaaaagtattcagatgtatttttgacaga
aaagaggggaattattttgtagggagaacagaatatgattcacccgatgtagataatacg
gttctggtttcagcagaagaaacatacatttctataggtgaatttgctgatgttaaaata
acctcggcagaggagtttgatttgtatggagaactgatctga
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