Chryseobacterium oranimense: N0B40_02225
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Entry
N0B40_02225 CDS
T08904
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cora
Chryseobacterium oranimense
Brite
KEGG Orthology (KO) [BR:
cora00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cora03032
]
N0B40_02225
03400 DNA repair and recombination proteins [BR:
cora03400
]
N0B40_02225
Enzymes [BR:
cora01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N0B40_02225
DNA replication proteins [BR:
cora03032
]
Prokaryotic type
DNA Topoisomerases
N0B40_02225
DNA repair and recombination proteins [BR:
cora03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N0B40_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UWX61098
LinkDB
All DBs
Position
complement(445910..447016)
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEIISHLKPSKIVKIMKDPEASAKAVHLIYTTDAETAGITRKKTGKKYSYYREG
EKIKDKDEISRINKLVIPPAWENVWICALENGHLQATGFDAKSRKQYRYHPLWSALRNHT
KFYRMLQFGYALPDIRLQVEQDLALRNFEKRKILALIVSLMQHTNIRIGNNAYEKLYGSF
GLTTLKDKHVKIKGQKITFSFKGKKGIMHTIDLRSRRLSRLVQKCKDIPGKELFQYFDDD
GNRHSVDSGMVNEYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENNSQYKKKVKEA
LEIVAQHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELEQIEENDGKAGLTHEEKLVL
KILETEKM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatactgacctggaaattatttcccacttaaagccttcaaaaattgtaaag
atcatgaaggatcccgaagcctccgcaaaggcggtacatcttatatataccaccgatgcg
gaaactgccgggattacccgtaagaaaaccggaaagaaatattcttattacagggaaggt
gagaaaattaaggataaggatgaaatcagccggatcaacaaactggttattcctcctgca
tgggaaaatgtatggatctgtgctctggaaaacggtcatcttcaggctacagggtttgat
gcaaaaagcagaaaacaataccgttatcatcctttgtggagtgctttaagaaaccacacc
aaattttacagaatgctacagttcggatatgctttgcctgacataaggcttcaggtagag
caggatctggctttgaggaatttcgaaaaaagaaaaatactggcattaattgtgagtttg
atgcagcataccaacatccgtattggcaacaatgcgtatgaaaagctgtatggttctttc
ggattaactactctgaaagacaaacatgtaaaaattaagggccagaagatcaccttttca
tttaaaggaaaaaaagggattatgcatactattgaccttcgaagcagaaggctttcaagg
ctcgtacaaaagtgtaaggatattcccggaaaagagcttttccagtattttgatgatgat
ggaaaccgtcattcggtagattcagggatggtgaacgaatatatcaaggaaataagcggt
gaagattttacggccaaagatttcaggacctggtcgggaacggtaagtgccctgatcgct
tttaaagaaatcggctatgctgaaaataacagccagtataaaaagaaggtaaaagaagcc
ctggaaattgttgcccagcatcttggaaataccagtacggtctgcaggaaatattatgtg
catccgctggtcattaatctgtacgaaaacaatacgatcaaaaaatatcttgatgagctg
gagcagatcgaggaaaatgacggaaaggcaggtcttacccatgaagaaaagctggtactg
aaaattctggaaactgaaaagatgtaa
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