Chryseobacterium oranimense: N0B40_08235
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Entry
N0B40_08235 CDS
T08904
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
cora
Chryseobacterium oranimense
Pathway
cora02024
Quorum sensing
cora03060
Protein export
cora03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cora00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N0B40_08235 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N0B40_08235 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N0B40_08235 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cora02044
]
N0B40_08235 (secD)
Secretion system [BR:
cora02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N0B40_08235 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UWX62267
LinkDB
All DBs
Position
complement(1755575..1758484)
Genome browser
AA seq
969 aa
AA seq
DB search
MQGKGLITIVAIVLGLICLNELLPTWYASKIERQATAVAGDNPEKYQKEIARLSKDTLNL
GFTKLYYTKAKDKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPVLIEALNKTDEVQ
KNSTKSYIDNFFDQFEAINKAKGTNLKLADPELFGNTNLSEIKYNTSDDQVKSIIKRRID
LSVGTAFEVIRTRIDKMGAVQPNVQRVPGTARISVEMPGMKDIDKVKKMLQTSAKLQFWE
VQQVPEMAPYFQTLTTMVAIKGDSMGVAKNINFMNLLNLDKLRANGVASVKLSDTAAVNK
ILNSKVGQSLRPANIKYTQFMWGYKPEATDAESLVLYAIRGNINQKAPVDGAVETASIGY
DELSRVVVDMQMDSKGAKEWKTLTEKNVGKPVAVTLDGRVYTAPNVVNAIPNGRTQISGN
FSQEEAKELVDVLGAGKLPAGAKVVQATVVGPSLGQESINAGVISFAIAFLIIIVYIIFY
YGGAGVYAVIAMIVNLFYIFGIMDSGDFTLTLPGIAGIVLTMAMAVDTNVIIYERTKEEL
FAGKSILEAYKDGFKHALSAIVDGHLTTLLTAGVLFLFGTGPIKGFALTLGIGILMTFFT
SVLLSRVMIFSRLNKGKHLSVWTPPTKNLFRNTWIDFIGKRKYAYIVSAVLTVICIASIA
IHGFKYGIDFTGGRNYVVRFDKAVNAEDVEQNLVKVFKTEDGKNSSVEAKTFGNDKQLKI
STDYLIEDESLKADQTIEQKLYEGLKTHLPANTTLSDFKSADKDHAGIISSEKVGPTVAD
DIKTHGVLAVVAALAGIFIYILLRFRKWQFSLGAVVALFHDAVIILGAYSLLHKFMPFNM
EINQDFVAAILTVLGYSINDTVIIFDRIREYLREKKSLTLAGLFDDSISSTLGRTFNTSF
TTILVILAIFIFGGDNLRGFMFAMLIGIGFGTYSSIFIASAIAYDFLKKGKEEGVHGKTT
TTKEVLASK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacaattgttgctattgtactagggttaatttgcttaaat
gagctattaccaacttggtacgccagcaaaattgaaaggcaggcgactgctgttgcagga
gacaatccggaaaagtatcagaaagaaattgcaagactttctaaggatactttgaacctg
ggattcacaaaactttattacactaaagccaaagacaaggaaatgaaacttggtcttgac
ttgaaaggagggatcaacgttcttttggaaatcaaccagagagacttggtgaatgattta
accaattattctacgaatcctgttcttattgaggctttaaacaaaactgatgaagttcag
aagaattccacaaaatcttatattgataatttcttcgaccagtttgaagcgatcaacaag
gcaaaagggactaaccttaagctggcagatcctgaacttttcgggaataccaatttatca
gaaatcaagtacaatacttctgatgatcaggtgaaaagcattatcaaaagaagaattgat
ctttctgtaggaacagctttcgaggtaatcagaaccagaatcgataaaatgggtgctgtg
cagcctaacgttcagagagtacctggtacggcaagaatttctgttgaaatgcctggtatg
aaagatatcgacaaggtgaagaaaatgcttcagacttctgcaaaacttcagttctgggaa
gtacagcaggttcctgaaatggcgccatatttccagacattgactacaatggtagctata
aaaggtgattctatgggagttgcgaagaatatcaacttcatgaaccttttgaaccttgac
aaattaagagcaaacggtgttgccagtgtaaaactttccgatactgctgctgtaaacaaa
attctgaatagtaaagttggtcagtcattacgtcctgccaacattaaatatactcagttt
atgtggggatacaaacctgaagctacagatgctgaaagtttggtattatacgcaatcaga
gggaatatcaaccagaaagctccggtagacggtgctgttgaaaccgcaagcattggctat
gatgagctgagcagagtggtagtagatatgcagatggactccaaaggagctaaagaatgg
aaaacattaaccgagaaaaacgtaggtaaaccagttgcggtaacgttagatggcagagta
tatactgcaccaaacgttgtcaacgctattcctaacggtagaacccagatctccggtaac
ttctctcaggaagaagctaaagaactggtagacgttttgggagcaggtaaattaccggcg
ggcgcaaaagtagttcaggctacagtagtgggaccttcattaggacaggaatctattaac
gcaggggttatctcatttgctatcgcatttttaattattattgtttacatcattttctat
tacggtggtgcaggagtttacgcggtaattgcaatgattgttaacttattctatattttc
ggaattatggattccggagactttacccttacacttcctggtatcgcaggtattgttctt
acaatggccatggccgtagatacgaacgtaattatctacgaaagaaccaaagaagaactt
ttcgcaggtaaaagcattcttgaagcttataaagacggtttcaaacatgcattaagtgcg
attgttgatggtcacttaacgacattattaacggctggtgtacttttcttattcggaaca
ggacctattaaaggatttgctttgactttaggaatcggtatcttaatgacattctttact
tccgtattactttcaagagtaatgatcttctcaagactgaacaaaggaaaacacctttct
gtctggactcctccaacaaaaaatctattcagaaatacatggatcgatttcatcggaaag
agaaaatacgcatatatcgtttctgctgttttaacagtaatttgtattgcttctattgct
attcacggattcaaatacggaatcgattttacaggaggtagaaactatgtggtaagattt
gacaaagcagttaatgctgaagatgttgaacagaacttagtaaaagtattcaaaactgaa
gacggtaaaaactcttctgttgaagcaaagactttcggaaacgacaagcagttgaagatc
tctacagattaccttatcgaagatgaatctttaaaagctgaccagacgatagaacaaaaa
ctatacgaaggtttaaaaacacatttacctgccaatactacattaagcgatttcaaatct
gcagataaagaccacgcaggaatcatttcttctgaaaaagtgggacctacggtagcagac
gacatcaaaactcatggtgtgcttgcagtagtagctgctttggccggtatctttatctat
atcctgttaagatttagaaaatggcagttctcattaggtgctgttgtggctctattccat
gatgcggtaattattttgggagcttattcattgcttcataaatttatgccgttcaatatg
gagatcaatcaggatttcgttgcggcaatccttactgtattgggatattcaattaatgat
accgttattatcttcgatagaatcagggagtatctgagagagaagaaatctttaacatta
gccggattatttgatgactctatttccagtacattgggtagaacattcaacacttcattc
acaacaatccttgtaattttagccatcttcatttttggaggtgataacctgagaggattt
atgtttgcgatgttgatcggtatcggattcggtacttattcatctatctttattgcatcg
gctatcgcttatgacttccttaagaaaggaaaagaagaaggcgtgcatggtaaaacaacg
accaccaaagaagtgcttgcttcaaagtaa
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