Chryseobacterium oranimense: N0B40_08665
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Entry
N0B40_08665 CDS
T08904
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cora
Chryseobacterium oranimense
Pathway
cora03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cora00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0B40_08665 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cora03019
]
N0B40_08665 (rny)
Messenger RNA biogenesis [BR:
cora03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N0B40_08665 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UWX62351
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All DBs
Position
complement(1854705..1856276)
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AA seq
523 aa
AA seq
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MTTATIIVGVICLIIGAVIGILFSKSSLNTKAKFIVDDAKKNAENLIEKANVQAESIKKE
KNLQAKEKFLELKSQHDADIQSREKKMQEIEKRIKDKEHKLNDELSKTGKLEKDLDKQIA
DYAKKNEILERKQQELDVATTKKVEILEKIANYTAEEAKAELVETMKAEAKTRAQAHVQG
IMEEAQLNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALE
AVTGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEE
EIIEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENAEVVNAIGAHHDEIEMKSLLS
PIIQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESG
KVNDEVANQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagccaccattatagtaggcgttatttgcttaattataggagcagtgataggg
attcttttctctaagagctcactgaataccaaagcaaaatttattgtagatgatgcaaag
aaaaatgccgaaaaccttatagaaaaagcaaacgttcaagctgaatccataaagaaagaa
aagaatctacaggccaaagaaaaatttttggaactgaaatctcagcatgatgcagacata
cagtcccgcgagaaaaaaatgcaggagatcgaaaaaagaatcaaagacaaggaacacaag
ctgaatgacgagcttagcaagaccggaaaacttgaaaaagaccttgacaagcagattgca
gattacgctaagaaaaacgaaatcttagagagaaaacagcaggaactggacgttgctact
accaaaaaagtagagatcctggagaaaattgccaactatacggcagaagaagcgaaagca
gaattggtagaaaccatgaaagccgaagcgaaaacaagagctcaggcacacgttcagggg
atcatggaagaagcacagctgaatgccaagaacgaagcaagaaaaattgttatccagacc
atccagagaatcggaaccgagcaggctatcgaaaactcagtatccgttttcaatattgaa
tctgatgaggtaaaaggaagaatcatcggtagagaaggtagaaatatccgtgctttagaa
gcggtgaccggagtagaaatcattgttgatgatacccctgaagcgatccttctttcatgc
tttgacccggtgagaagagaaattgcaagattatcccttcacagactggtaacagacgga
agaatccacccggcaagaatcgaagaggtagtagaaaagactagaaaacagatcgaagaa
gagatcattgaagtaggaaaaagaaccattattgatcttggaatccacggactgcaccct
gaactgattaagattgtaggtagaatgaaataccgttcttcttacggacagaacctttta
caacactcaagagaagttgcgaatattgctgctacaatggctgctgaattaggacttaac
gtaaagctagctaaaagagcaggacttttacacgatatcggtaaagttcctgagcaggaa
tcagaacttcctcacgctttattaggaatgcagtgggctgaaaaatatggtgaaaatgca
gaagttgttaacgccatcggagctcaccacgacgaaattgaaatgaagtcattattatca
ccgatcatccaggtagccgatgcgatctcaggagcaagaccgggagcaagaagacaggta
cttgaatcatatatccagagactgaaagatcttgaatcagcagcgttaagctttgatgga
gtatcaagcgcttatgcaatccaggctggtagagaactgagagtaatggtagaaagcgga
aaagtaaatgatgaagtagccaatcagctgtcttatgacatctctgaaaagatccagaat
gagctgacctatccgggacaggtaaaagtaacggtaatcagagaaacaagagctgtgaat
attgcaagataa
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