Chryseobacterium oranimense: N0B40_19055
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Entry
N0B40_19055 CDS
T08904
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cora
Chryseobacterium oranimense
Pathway
cora03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cora00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0B40_19055 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cora03019
]
N0B40_19055 (groL)
03110 Chaperones and folding catalysts [BR:
cora03110
]
N0B40_19055 (groL)
03029 Mitochondrial biogenesis [BR:
cora03029
]
N0B40_19055 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cora04147
]
N0B40_19055 (groL)
Enzymes [BR:
cora01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N0B40_19055 (groL)
Messenger RNA biogenesis [BR:
cora03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N0B40_19055 (groL)
Chaperones and folding catalysts [BR:
cora03110
]
Heat shock proteins
HSP60 / Chaperonin
N0B40_19055 (groL)
Mitochondrial biogenesis [BR:
cora03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N0B40_19055 (groL)
Exosome [BR:
cora04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N0B40_19055 (groL)
Exosomal proteins of other body fluids (saliva and urine)
N0B40_19055 (groL)
Exosomal proteins of breast cancer cells
N0B40_19055 (groL)
Exosomal proteins of colorectal cancer cells
N0B40_19055 (groL)
Exosomal proteins of bladder cancer cells
N0B40_19055 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
UWX60477
LinkDB
All DBs
Position
complement(4146936..4148561)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDRVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVTAVVENLKSQSQEVGDSTDKVKQVASVSANNDETIGALIAEAFGKVGKEGVITVEEA
KGIDTTVDVVEGMQFDRGYQSPYFVTNPEKMVAEVENPYILLVEKKISSMKELLPVLEPI
AQGGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENISLDMLGTAEKVTIDKDNTTIVNGGGDEAKIKGRVAQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAISALENLTGINADETTGIRIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGTGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaattcgatattgaatcaagagacgctctgaagagaggagttgat
gcattggctaatgcagtaaaagtgactttaggtcctaaagggagaaacgtagtgatcgaa
aaatctttcggtgctccgcacgtaactaaggacggtgtttctgtagcgaaagaaatcgaa
cttgaagacagagtagaaaatatgggagctcagatggtaaaagaagtggcttccaaaacc
aatgatattgcaggagatggtactactaccgctactgttttggcacaggctatcgtaaga
gaaggtcttaagaacgtagctgcaggtgctaacccaatggatcttaaaagagggattgac
aaagctgtaactgcagttgttgaaaacttgaaatcccagtctcaggaagtgggagattct
acagataaagtgaagcaggtggcttctgtatctgctaacaacgacgaaactattggtgct
ttgatcgctgaagctttcggaaaagtaggtaaagaaggagtgattactgtagaagaagct
aaaggtatcgatacaacggtagacgttgtagaaggtatgcagttcgacagaggataccag
tcaccttacttcgtgactaaccctgagaaaatggtagctgaagtagaaaacccatacatc
cttttggtagagaagaaaatctcttccatgaaagaattgcttccggttcttgagccgatt
gcacagggtggaaaatctctattgattatctctgaagaagtggaaggtgaagctttagct
actttggtggtcaacaaattaagaggttctcttaaaattgctgctgtaaaagctcctgga
ttcggagacagaagaaaagcaatgttggaagatatcgcgatcttaactggcggacaggtt
atttctgaagagcaaggtttcactatggaaaacatctctctggatatgcttggaactgct
gagaaagtaacgatcgataaagataatacgactatcgtaaacggtggtggtgatgaagct
aaaatcaaaggaagagtagctcagatcaaagcccagatggaaacaactacttctgactac
gacagagaaaaactacaggaaagactggctaagttagccggtggtgttgccgtactttac
gtaggtgctgcttctgaagtggaaatgaaggagaaaaaagacagagtagatgatgccctt
cacgctacaagagcagccgttgaagaaggtatcgttgcaggaggtggtgttgctttagta
agagcaatctctgctttggaaaaccttacagggatcaatgctgatgaaactacaggtatc
agaatcgtgaaaagagctatcgaggagccattaagacaaatcgttgccaacgcaggcggt
gaaggttctgtaatcgttgccaaagtagcagaaggtacaggagacttcggatacaacgct
aaaactgacgagtatgtaaacatgcttgaagcaggaatcatagaccctacgaaagtaaca
agagttgcccttgaaaacgcagcttctgtttccggaatgcttttaaccactgaatgtgtc
atcactgaagtgaaaaaagacgagccagctatgccaatgggtggtggaatgccaggaatg
atgtaa
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