Corynebacterium sp. Z-1: RIU96_01240
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Entry
RIU96_01240 CDS
T11129
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
core Corynebacterium sp. Z-1
Pathway
core00074
Mycolic acid biosynthesis
core01100
Metabolic pathways
core01110
Biosynthesis of secondary metabolites
Module
core_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
core00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
RIU96_01240 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
core01004
]
RIU96_01240 (pks13)
Lipid biosynthesis proteins [BR:
core01004
]
Polyketide synthase
Modular PKS
RIU96_01240 (pks13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Abhydrolase_6
Abhydrolase_1
Thiolase_N
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
WNI13111
LinkDB
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Position
complement(254293..259065)
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AA seq
1590 aa
AA seq
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MNETELITWLREWVAQTTGADIADIDPAKPLQTFGLSSRDAVIMSGELENLLGTRIDPTI
AYQYPTIASLAAALTAQKTPDAPQYQAARNRADHSPGTRDIAIVGTAGRFPGADSVSEFW
QLLIDGQVTTGPLPEGRWSEYLADPLMRTKLEDESTAGGYLSDIASFDNEMFGLSPLEAE
NMDPQQRIMLELAFEALEDAHIPASSLRGAPVGVFVGSSNNDYGLLMSSDPTTAHPYGLT
GASSAIIPNRISYAFDFRGPSVSVDTACSASLVSTHHAVRALRDGECDVALAGGVNIMAS
PHASLMFSELGVISPTERIHAFSADADGIVRSEAAGFLVLKRVDDAMNDGDTIYGVIKGS
ATNSDGHSNGLTAPNPEAQVDVLRRAYADAGIDPATVDLVEAHGTGTILGDPIEATALGA
VLGQKRTNAAPLLLGSAKSNIGHSESAAGAAALIKVVEALKHDTIPASVNYTAPNEYVDF
DAAHIEVVQDPREWPRYSGRRIAGVSGFGFGGTNAHVVVSDFDPADYSSEPVSTPAELVG
THSDSPAVALPVSGHLPSRRKDAAATVADYLEGRKDADLVPVARSLAKRNHARSAAVVQA
ASIAEAVKRLRQVAEGKTGPGIAVADSPAPVGPVFVYSGFGSQHRLMAKKLVEISPLFRR
RLEQLDQVVTFESGWSLMDLITDDEKTYDTETGQVAITAIQVAQTDLLASFGITPAATMG
MSMGEMAAAYGAGGLTGEEAVRIACHRARLMNEGVEQIAGTDAEGAMAVVELGREELAES
VRTHPEAEGVEPAVYAGPGMTTVGGPAKAVDVLVGALEAEEKFARKLQVKGAGHTSMLDP
IMGDLAGELAGLTGQPLRVPLYSSVDRGVVYAAGETVHNDEYFLRMTRQPVFFQDATEAA
LRAGHTTFVEIAPNPVAVMGMMNTAFSAGKPDVQLLFSTKRKVDEVESLRDLAAKLYVQG
VPVDFTGFYGPGPLLAAPATTMKRNRLWTSARPLSGSASLLGTKVALPDGKVAYAVQADQ
VYSPHQLIEAVAEQVSPGASVVATQEHGVLPAHGELTTIAAHSLGGTSVSVYSGDTLLVE
GFATTLDLAGPRSPQGVAEVAEPAEAAPLRSVEEVDAVRWDPSSGETVAQRLRAIVSETM
GYDADDLPDELPLIDLGLDSLMGMRIKNRVENDFQIPPLQVQTLRDASVADVVRIVEQAV
AGNSDAPQPRPDNSPTRDVASEVAKAEAAGTTGVGVAPRDASERMVFGAWAKYAGAAAAG
VTSPLPAIDDAVAAEIAAHLSERSGIEVTAAEVSGADALETLANKVREGLETPVDGNVRV
FRERGQGVDKPSVFVFHPAGGSSSVYEPLSRRLARDVPVYGIERLEGTLEERAAAYVEDI
ERLSDGRPVVLAGWSFGGALAYEVAHQLGDDKVAFIALLDTTRPSNPAPKTKEETRKRWE
RYAQFAKDTYGLDFPVPYDLLDSAGEDAVLNMLGEFLATTDASAHGLAAGVLEHQRASFV
DNQILGNLDFARWAGVKVPVLLFRAERMHEGAIILEPAYAHIDEDGGWGGIVDDLEIVHL
PGDHLAVVDEPAVGIVGKHMNDWIDNVNRR
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaactgagctgatcacctggttgcgcgagtgggttgcccagaccacgggagcc
gacatcgccgacatcgacccggccaagcccctgcaaacgttcggcttgtcctcgcgcgac
gctgtgatcatgtcgggtgagctggagaatctgcttggcacgcggatcgatccgacgatc
gcttaccagtacccgacgatcgcttcgttggccgccgcgctgaccgcgcagaagaccccg
gacgctccgcagtatcaggccgctcgcaatcgcgcggatcattcaccgggcacccgcgac
atcgccatcgtcggcaccgcgggccgcttccccggcgcggacagcgtcagcgagttttgg
cagctgcttatcgacggccaggtgaccaccggacccctgcccgaggggcgctggtcggag
tacctggccgaccccctcatgcgcaccaagctcgaggacgaaagcaccgccggcgggtat
ttgagcgacatcgcgtccttcgacaacgaaatgttcggtctcagcccgctcgaggccgag
aacatggacccgcagcagcgcatcatgctggagctggcgttcgaggcgctcgaggacgcg
cacattcccgccagctccctgcggggtgcccccgtcggggtgttcgttggttcctcgaac
aacgattacggcctgctcatgtcgtcggatcccaccacggcgcacccttacggcctgacc
ggggcgtcctcagcgattattccgaaccgcatctcctacgcgtttgatttccgcggacct
tccgtcagcgtggacacggcctgctcggcatcgctggtgtccacccaccacgcggtgcgc
gcgttgcgcgacggggagtgcgacgtggcgctcgccggcggcgtcaacatcatggccagc
ccgcacgcctcgttgatgttctccgagctcggggtgatttccccgaccgagcgcatccac
gcgttttccgccgacgccgacggcatcgtccgctcggaggccgccggtttcctcgtgctc
aagcgcgtcgacgacgcgatgaacgacggcgacacgatctacggtgtgatcaagggctcg
gccaccaactccgacgggcactccaacgggctgaccgcaccgaacccggaggcccaggtc
gatgtcctgcgccgcgcgtacgcggatgcgggcatcgacccggccacggtcgatctcgtc
gaggcgcacggcaccggcacaatcctcggcgacccgattgaggccaccgctctcggagcc
gtgctcgggcaaaagcgcacgaacgccgccccgctgctgctcggctccgcgaaatcgaac
atcggccactccgagtccgccgcgggcgcagccgccctgatcaaggtggtcgaagcactc
aagcacgacaccatcccggcgtcggtgaactacaccgccccgaacgagtacgtcgatttc
gacgccgcccacatcgaggtggtccaggacccgcgcgagtggccgcgctactcgggccgc
cgcatcgcgggcgtgtccggcttcggcttcggcggtacaaacgcccacgttgtggtgagt
gacttcgaccccgccgattactcctcggaacctgtttcgacgccagctgagcttgtcggc
acccacagcgacagccccgctgtcgcactgccggtgtccggccatctgccgtcgcgccgc
aaagacgccgccgcgaccgtggcggactacctcgagggccgcaaggacgcggacctcgtg
cccgtggcgcgctcgctggcaaagcgcaaccacgctcgctccgccgcggtcgtgcaggcg
gcgagcatcgcagaagccgtcaagcggctgcgccaggtggcggagggcaagaccgggccg
ggcatcgctgtggccgattccccggcgcccgtcggcccggtgttcgtctactccggattc
ggctcgcagcacaggctgatggcgaagaagctcgtggagatctccccgctgttccgccgc
cgtctggagcagctcgaccaggtggtcacgttcgagtccggctggtccctgatggacctg
atcaccgacgacgaaaagacctacgacaccgaaaccggccaggtggcgatcaccgcgatc
caggtcgcgcagacggaccttttggccagctttggtatcaccccggccgccacgatgggc
atgtcaatgggcgagatggccgcggcctatggcgcgggcgggttaacgggtgaagaggcc
gtgcgcatcgcgtgccaccgtgcccgtttgatgaacgagggcgtggagcagatcgccggc
accgatgccgagggtgcgatggccgtcgtcgagctcgggcgcgaggagcttgccgagtcc
gtgcgcacccaccccgaggccgagggcgtggagcccgcggtctatgccggacccggcatg
accactgtgggcgggcccgcaaaggcggtcgacgtgctggttggtgcacttgaggccgag
gagaagttcgcccgcaaactgcaggtcaagggcgcgggacacaccagcatgcttgatccc
attatgggcgatctcgccggcgagctcgccggcctgaccggccagccgctgcgcgtgccc
ctgtactcctccgtggaccgcggcgtggtgtacgccgccggcgagacggtgcacaacgac
gagtacttcctgcgcatgacccgccaacccgtcttcttccaggacgccacggaagcggcc
ctgcgcgccgggcacaccacgtttgttgaaatcgccccgaacccggtggccgtgatgggc
atgatgaacaccgcgtttagcgcgggcaagccggacgttcagcttctgttctccaccaaa
cgcaaggtcgatgaggttgagtcgctgcgtgatctagcggccaagctctacgtccagggc
gtgcccgtcgacttcaccggcttctacggtccgggtccgcttcttgccgcacccgcgacg
acgatgaagcgcaaccgcctgtggacctccgcgcgcccgctgtccggcagcgcgtcgctg
ttgggcaccaaggtcgcactgcccgacggcaaggtggcatacgcggtgcaggccgaccag
gtctacagcccgcaccagctcatcgaggccgtggccgagcaggtcagcccgggcgcgagc
gttgtggccacccaggagcacggggtcctgcccgcgcacggcgagctgaccacgatcgcg
gcgcactccctcggcggcaccagcgtttccgtctacagcggtgacacgctgctcgtagaa
ggcttcgctaccacgctcgatctggcgggcccgcgctcgccgcagggtgtggccgaggtc
gccgagcccgccgaggcagcaccgctgcgcagcgtcgaggaggtcgacgccgtgcgctgg
gacccgagctcgggtgaaacggtggcgcagcgcctgcgcgcgatcgtctccgagacgatg
ggctacgacgccgatgacctgcccgacgagctgccgctgatcgacctcgggttggattcg
ctcatgggcatgcgcattaaaaaccgcgtcgaaaacgacttccagatcccgccgctgcag
gtgcagacgcttcgcgacgcctccgtggccgacgtggtccgcatcgtcgagcaggccgtc
gccggcaacagcgacgccccgcagccgcgccccgacaactcgccgacccgcgacgtcgct
tccgaggtggccaaggccgaggccgccgggacaactggggtgggcgttgctccgcgcgac
gcctccgagcgcatggtgttcggcgcctgggcgaagtacgccggcgcagctgctgccggt
gtgacctccccgctgccggcaatcgacgacgccgtcgccgccgagattgccgcgcacctg
tccgagcgctccggcatcgaggtcacggcagccgaggtcagcggcgcggacgcgctcgag
acgctggcgaacaaggtgcgcgagggcttagagacgcccgtggatggcaacgtgcgggtg
ttccgggagcgtggtcagggcgtcgataagccaagcgtgttcgtcttccacccggccggg
ggatcgagctcggtctacgagcccttgtcgcgccggctggccagggacgtgcccgtctac
ggcattgagcgcctcgagggcacgttagaggagcgcgccgcggcctacgtcgaggacatc
gagcggctttccgacggccgcccggtcgtcctcgccggctggtccttcggcggtgctttg
gcctatgaggtcgcccaccagctcggcgacgacaaggtcgccttcatcgcgctgctggac
accacgcggccgtccaatcccgcgccgaagacgaaagaggaaacgcgcaagcgctgggag
cgctacgcgcagtttgccaaggacacctacgggctcgacttcccggtgccctacgacctg
ctcgacagcgcgggtgaagacgccgtgttgaacatgctcggcgagttcctcgccaccacc
gacgcctccgcccacgggttggctgccggtgtgctggagcaccagcgggcatcgttcgtg
gacaaccagatcctgggcaacctcgacttcgcccgctgggctggggtgaaggtgccggtg
ctgctgttccgcgcggagcggatgcacgagggcgcgatcatcctcgagccggcctacgcc
cacattgacgaggacggtggctgggggggcatcgtcgacgacctggaaatcgtgcatcta
cccggtgaccacctcgcggtagtcgacgagccggcggtggggatcgtcggcaagcacatg
aacgattggattgataatgtcaaccgccgctaa
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