Corynebacterium sp. Z-1: RIU96_03135
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Entry
RIU96_03135 CDS
T11129
Name
(GenBank) BRCT domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
core Corynebacterium sp. Z-1
Pathway
core03030
DNA replication
core03430
Mismatch repair
core03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
core00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIU96_03135
03430 Mismatch repair
RIU96_03135
03440 Homologous recombination
RIU96_03135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
core03032
]
RIU96_03135
03400 DNA repair and recombination proteins [BR:
core03400
]
RIU96_03135
Enzymes [BR:
core01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIU96_03135
DNA replication proteins [BR:
core03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RIU96_03135
DNA repair and recombination proteins [BR:
core03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RIU96_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
Rv2179c-like
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
WNI13437
LinkDB
All DBs
Position
complement(641698..642684)
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AA seq
328 aa
AA seq
DB search
MPDNFPFVAVSVVTTGIHPSTGRLLTIDAVTFDADGAIGEEFHSVLNTGSDPGPRHNHGL
EPSDFAQAPRFSRHLKTLDRLIDDRTLVLHDAPLAWGFIVSEARRAMTAAARANRSRAKR
GGRRRQRVGHVPRPTAIVDTLASARRQGEIPLDIRPAAVARLIGLSAEDPAASVERALRP
EEDTSREQTLLIKDLFFALRESGELAQVVPDDLVADRFGLQRSIVRVDAENDTATAENPG
PYTASGGLKEGMEIVVTDDVAANPDEIISAALDHGLSYVEKLSRQTSLVVSDAKATGTPL
LGKAMHADRKGIPVLSVEEFERAVARLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacaatttcccgttcgtggcggtgagtgtggtcaccacgggcattcacccctcg
accggccggctgctcacgatcgacgccgtcaccttcgacgccgacggcgcgatcggcgag
gagttccattcggtgctgaacaccggctccgaccccggcccgcgtcacaaccacggcctt
gagccgagcgacttcgcccaggcaccgcgcttctcgcggcatctaaagacgctggatcgc
cttatcgacgaccgaacgctcgtgcttcacgacgcccccctggcgtgggggttcatcgtc
tccgaggcccggcgcgcgatgaccgccgccgcccgggcgaaccggtcgcgcgcgaagcgc
ggcggcaggcgccgccagcgcgtcgggcatgtgccgcgcccgaccgcgattgtggacacg
ctggcgagtgcgcgtcgtcaaggcgaaatcccgctcgatatccgccccgccgctgtggcg
cggctgatcggtttgagcgccgaggaccctgcggcctcggtggagcgcgcactgcgcccg
gaggaagatacctctcgcgagcagacgctgctgatcaaggacctgttcttcgcgctgcgc
gaaagcggtgagctggcgcaggtcgtgccggacgacctcgtggccgaccgcttcgggctg
cagcgctcgatcgtgcgcgtggatgccgaaaacgacacagcaaccgccgagaatccgggc
ccgtacaccgcgtccggtgggctaaaagagggcatggagatcgttgtcaccgacgacgtc
gcggcaaacccggacgagattatctcggctgccctcgaccacggcctgagctacgtggag
aagctctcgcgccagacctcgctcgtggtctcggacgccaaggccacgggcacgccgctg
ctcggcaaagcgatgcacgcggaccgcaagggcatcccggtgctctcggtcgaggagttt
gaacgcgccgtggcgcgcctgggttaa
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