KEGG   Corynebacterium sp. Z-1: RIU96_03575
Entry
RIU96_03575       CDS       T11129                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
core  Corynebacterium sp. Z-1
Pathway
core00010  Glycolysis / Gluconeogenesis
core00020  Citrate cycle (TCA cycle)
core00260  Glycine, serine and threonine metabolism
core00280  Valine, leucine and isoleucine degradation
core00310  Lysine degradation
core00380  Tryptophan metabolism
core00620  Pyruvate metabolism
core00630  Glyoxylate and dicarboxylate metabolism
core00640  Propanoate metabolism
core00670  One carbon pool by folate
core00785  Lipoic acid metabolism
core01100  Metabolic pathways
core01110  Biosynthesis of secondary metabolites
core01120  Microbial metabolism in diverse environments
core01200  Carbon metabolism
core01210  2-Oxocarboxylic acid metabolism
core01240  Biosynthesis of cofactors
Module
core_M00009  Citrate cycle (TCA cycle, Krebs cycle)
core_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
core_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
core_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:core00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RIU96_03575 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RIU96_03575 (lpdA)
   00620 Pyruvate metabolism
    RIU96_03575 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RIU96_03575 (lpdA)
   00640 Propanoate metabolism
    RIU96_03575 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RIU96_03575 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RIU96_03575 (lpdA)
   00310 Lysine degradation
    RIU96_03575 (lpdA)
   00380 Tryptophan metabolism
    RIU96_03575 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RIU96_03575 (lpdA)
   00670 One carbon pool by folate
    RIU96_03575 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:core04147]
    RIU96_03575 (lpdA)
Enzymes [BR:core01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RIU96_03575 (lpdA)
Exosome [BR:core04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RIU96_03575 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 HI0933_like FAD_oxidored FAD_binding_3 DAO Thi4 GIDA 3HCDH_N AlaDh_PNT_C 2-Hacid_dh_C XdhC_C ApbA ThiF TrkA_N
Other DBs
NCBI-ProteinID: WNI13514
LinkDB
Position
726557..727969
AA seq 470 aa
MSNEHFDVVVLGAGPGGYVAAIRAAQLGKKVAVVEKKYWGGVCLNVGCIPSKSLIKNAEV
AHIFTREAKTFGIKGDVEFDYADAHERSRKVSEKIVGGVHYLMKKNEITEIHGLGTFKDA
STIEITEGDDAGKTVTFDNCIIATGSVVRTLPGIELSDNVVSYEEQILNPEAPQKMVIVG
AGAIGMEFAYVLSNYGVEVTVVEYMDRVLPNEDKDVSKEIARAYKKMGVKLLTGHATTAV
RDNGDSVEVDIAKNGSDKTETLTVDRVMISVGFAPRVEGFGLENTGVELTERGAIAVDDR
LRTNVKGIYAIGDVTAKLQLAHVAESQGIIAAETIADAETLEIEDYMMTPRATFCNPQVA
SMGYTEEQARKNWPDRDIKVAMFPFSANGKAIGLAESAGFAKLITDGEHGEILGCHLVGA
NASELLPEITLAQRFDLTAGEIARNIHIHPTLSEALKEVAHGVEGHMINL
NT seq 1413 nt   +upstreamnt  +downstreamnt
gtgagtaacgaacattttgacgttgttgtcctcggcgctggccccggtggctatgtcgcc
gccatccgagctgcccaactgggcaaaaaagttgctgtcgtagagaaaaagtactggggt
ggtgtctgcctgaacgtgggctgcatcccgtctaagtctctgattaagaacgccgaagtg
gcccacatctttacccgtgaggccaagaccttcggcatcaagggtgacgtggagttcgat
tacgcggacgcacacgaacgctcccgcaaggtctccgagaagatcgtcggcggcgtgcat
tacctgatgaagaaaaacgagatcaccgagatccacggcctcggcacctttaaggacgcc
tccaccatcgagatcaccgagggcgacgacgctggtaagaccgtcacgttcgacaactgc
atcatcgccacgggttccgtggtgcgcacgttgccgggcatcgagctgtccgacaatgtc
gtctcgtacgaggagcagatcctcaaccccgaggccccgcagaagatggtcatcgtgggt
gccggcgcgatcggcatggagttcgcttacgtcctgtccaactacggcgttgaggtcact
gtcgtcgagtacatggaccgcgtcctgcccaacgaggacaaggacgtgtccaaggagatc
gcccgcgcctacaagaagatgggcgtgaagctgctcaccggccacgccacgaccgcggtg
cgcgacaacggtgattcggtcgaggtggacatcgcaaagaacggctcggacaagaccgag
acactcaccgttgaccgcgtcatgatctccgtcggttttgccccgcgcgtcgagggcttc
gggctggagaacacgggcgtggagctgaccgagcgcggcgcgatcgccgtcgatgaccgc
ctgcgcaccaacgtcaagggcatttacgccatcggtgacgtcaccgcgaagctgcagctt
gcccacgtcgcagagtcccagggcatcatcgccgccgagaccatcgcggacgccgaaacc
ctcgaaatcgaggactacatgatgaccccgcgcgcgaccttctgcaacccgcaggttgcc
tccatgggctacaccgaggagcaggcccgtaagaactggccggatcgcgacatcaaggtc
gccatgttcccgttctccgccaacggcaaggcgatcggcctggccgagtccgccggcttt
gccaagctgatcacggacggcgagcacggtgagatcctcggctgccacctcgtcggcgcg
aacgcctccgagctcctgccggagattaccctggcccagcgcttcgatctgaccgccggt
gagatcgcacgcaacatccacattcacccaacgctctcggaggccctcaaggaggtcgcc
cacggcgtcgaggggcacatgattaacctctaa

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