Corynebacterium sp. Z-1: RIU96_03650
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Entry
RIU96_03650 CDS
T11129
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
core Corynebacterium sp. Z-1
Pathway
core00061
Fatty acid biosynthesis
core00071
Fatty acid degradation
core01100
Metabolic pathways
core01212
Fatty acid metabolism
core02024
Quorum sensing
core04146
Peroxisome
Module
core_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
core00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RIU96_03650
00071 Fatty acid degradation
RIU96_03650
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RIU96_03650
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIU96_03650
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
core01004
]
RIU96_03650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
core04147
]
RIU96_03650
Enzymes [BR:
core01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RIU96_03650
Lipid biosynthesis proteins [BR:
core01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RIU96_03650
Exosome [BR:
core04147
]
Exosomal proteins
Exosomal proteins of breast milk
RIU96_03650
Exosomal proteins of breast cancer cells
RIU96_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WNI13528
LinkDB
All DBs
Position
complement(740423..742126)
Genome browser
AA seq
567 aa
AA seq
DB search
MASHADKPWLDSYTEWTAPNLDYSTATLTKIYADNITANGSKIATRFFGRTMTYAELDSE
VRRAAAGLKSFGVKAGDRVAIMLPNCPQHVVAFFAAQLLGAVVAEHNPLYTAAELRPQFA
DHGARVAIVWDKVAGTVNELRDDTDITTVVSVDMTQAMPLPMRLALRLPLKRLREARAEL
TAPATSTVPWEALVSSALVNNADQLEEAEVSPDTPALILYTSGTTGRPKGALLTHANLCA
NVTQGIAWVKDFQERDQRMVATLPFFHSFGLTFSLTLAMKIGSEVILLPAPKIDLIMSAI
KKYKPTFMPGVPTLFERIVAQAKEDNVDISSLNIAFSGASSLPVAVIDEWEKLTGGRLVE
GYGLTETSPILIGNPESADRRPGYIGLPFPDTDIRIANPENLDEDMPYGEAGEILARGPQ
VFGGYLDNPEATEQAFHNGWFRTGDMGIMESDGFVKLVSRIKELIITGGFNVYPAEVEEV
IRAHKDVEDVAVVGRPRPDGSEDVVACVTLTDGAKLDSEGLRAYAKKHLTAYKVPRTFYH
FEELARDPMGKIRRREVQADLLAQLED
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcacgcagacaaaccctggctcgattcctacaccgagtggaccgcccccaac
ctggattacagcacagcgacgctcacgaagatttacgccgacaacatcacggcaaacggg
tcgaagatagcgacccgtttcttcggtcgcacgatgacctacgccgagcttgatagcgag
gtccgccgcgccgccgccgggctgaaatccttcggcgtcaaagcgggcgaccgcgtggcg
atcatgctgccgaactgcccgcagcacgtggtggctttcttcgccgcacagctgctcggc
gcggtcgtcgccgagcacaacccgctctacaccgccgccgagctgcgcccgcagtttgcc
gaccacggcgcccgagtggccatcgtgtgggacaaggtcgcgggcaccgtcaacgaactg
cgcgacgacaccgatatcaccaccgtcgtcagcgtcgacatgacccaggcgatgcccctg
ccaatgcgcctcgccctgcgcctgccgctgaagcgtctccgtgaggcacgcgccgagctc
accgcgcccgcgacctccaccgtgccgtgggaggcgctggtcagctccgcgctggtaaac
aacgccgaccagctcgaggaagccgaggtctcccccgacaccccggcgctgatcctgtac
acctccggcacgacgggtcgccccaagggcgcgctactgacccacgccaacctgtgcgcc
aacgtgacccagggcatcgcgtgggtcaaggacttccaggagcgcgaccagcggatggtg
gccaccctgccgttcttccactccttcggcctgacgttctccctgaccctcgcgatgaag
atcggcagcgaagtgattctcctgcctgccccgaagatcgacctcatcatgtcggccatt
aagaagtacaagccgaccttcatgccgggcgtgcccacactgttcgagcgcatcgtcgcg
caggccaaggaagataacgtcgacatctcgagcctcaacattgctttctccggtgcttcc
tcgctcccggtcgcggtgatcgacgagtgggaaaagctcaccggcggccgcctcgtggag
ggctacggcctgaccgaaacctcgccgatcctcatcggcaaccccgaaagcgcggatcgt
cgccccggctacatcggcctgcccttcccggataccgatatccgcatcgccaacccggag
aacctggatgaggacatgccctacggcgaggccggcgagatcctcgcccgcggcccccag
gtgttcggcggctacctggataaccccgaggccaccgaacaggcgttccacaacggctgg
ttccgcaccggtgacatgggaatcatggagtcggacggctttgtcaagctcgtctcgcgc
atcaaggagctcatcatcaccggcgggttcaacgtctaccccgccgaggtcgaggaggtc
atccgcgcgcacaaggatgtcgaggacgtcgccgtcgtcggccgaccccgcccggacggc
tccgaggatgtcgttgcctgcgtcaccctcaccgacggtgccaagttggactccgagggc
ttgcgcgcttacgcgaagaagcacctcaccgcctacaaggtgccgcgcacgttctaccac
ttcgaggagctcgcccgcgaccccatgggcaagatccgccgccgcgaggtccaagcggac
ttgctcgctcagctcgaggactag
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