Corynebacterium sp. Z-1: RIU96_05300
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Entry
RIU96_05300 CDS
T11129
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
core Corynebacterium sp. Z-1
Pathway
core00730
Thiamine metabolism
core01100
Metabolic pathways
core01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
core00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RIU96_05300 (thiC)
Enzymes [BR:
core01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RIU96_05300 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WNI13834
LinkDB
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Position
complement(1079567..1081306)
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AA seq
579 aa
AA seq
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MTDSYAQEIHPKHSYAPIRAGGLEVPETAISLDDSPSGPNEPFRTYRTRGPWAQPEEGLP
ALRSTWIAERGDVEEYTGRQRNLLDDGTRAAKRGSASEEWRGARRNPLRAHPGKRVTQMH
YARRGEISPEMEFVALREHCDVEKVRSQVAAGRAIIPNNVNHPESEPMIIGNAFLTKINA
NIGNSAVTSSIREEVDKLRWATRWGADTVMDLSTGNDIHTTREWIIRNSPVPIGTVPIYQ
ALEKVGGIAEDLTWEIFRDTVIEQCEQGVDYMTIHAGVRLPFVPLTTRRVTGIVSRGGSI
MAGWCLAHHKESFLYENFDELCEIFAAYDVSFSLGDGLRPGSVADANDAAQFAELKTIGE
LCHRAWDFDVQVMIEGPGHVPLDMIQINNDKEEEWCGGAPFYTLGPLVTDIAPGYDHITS
AIGAANIAAGGTAMLCYVTPKEHLGLPNKDDVKTGVITYKIAAHAADVAKGHPGARDWDD
AMSKARFEFRWEDQFALSLDPDTARAYHDETLPAEPAKTAHFCSMCGPKFCSMRISQDIR
DEFGDTIESLGMPTVDAVLGEQHMAHVFREHGSQVYLPE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattcgtacgcgcaagaaatccaccccaagcacagctacgcgccgatccgcgca
ggcggcctggaagtgcccgaaaccgccatctcactcgatgactcgccaagcggtccaaac
gagcccttccggacctaccgcacccgcgggccatgggctcagcccgaggaaggactaccg
gcgctgcgcagcacgtggatcgccgagcgcggcgacgtcgaggagtacactgggcgccaa
cgcaacctgcttgacgacggcacacgggccgccaagcgcggctccgcctccgaggagtgg
cggggagccaggcgaaacccgttgcgcgcccaccccggcaagcgcgtgacccagatgcac
tacgcccgccgcggcgaaatcagccccgagatggagttcgtcgccctgcgcgagcactgc
gacgtagagaaggtgcgctcgcaagtcgccgcaggccgcgcaatcatcccgaacaacgtc
aaccaccccgagagcgagccgatgatcatcggcaatgcgtttttgaccaagatcaacgcc
aatatcggcaactccgccgtgacctcgtcaatccgcgaggaggtggacaagctacgctgg
gcaacccgctggggtgccgacaccgtgatggatctgtccaccggcaacgacatccacacc
acccgcgagtggatcatccgcaactcccccgtcccgatcggcaccgtgcccatctaccag
gccctggagaaggtcggcggcattgccgaggatttgacctgggaaatcttccgcgacacc
gtcatcgaacagtgcgagcagggcgtggactacatgaccatccacgccggagttcgcctg
ccgttcgtgccgctgaccacccggcgcgtcacgggcatcgtctcccgcggcggctcgatc
atggccggctggtgcctcgcccaccacaaggagtccttcctctacgagaacttcgacgag
ctctgcgagatcttcgcggcctacgacgtctccttctcgctcggtgacggcctgcgcccc
ggctccgtggccgacgccaacgacgccgcccaattcgccgagctaaagaccatcggcgag
ctgtgccaccgcgcctgggatttcgacgtccaggtgatgatcgagggccccggccacgtg
ccgctggacatgatccagatcaacaacgacaaggaagaggagtggtgcggcggggcgccc
ttctacacgcttggccccctggtcaccgacatcgctccggggtatgaccacatcacctcc
gcgatcggcgcggccaacatcgccgcgggcggcaccgcgatgctgtgctacgtcaccccg
aaggagcacctcgggctgccaaacaaggacgacgtgaagacgggcgtgatcacctacaag
atcgccgcgcacgccgccgacgtggcgaaggggcatccgggcgcccgggactgggacgac
gcgatgagcaaggcccgcttcgagttccgctgggaggaccagttcgcgctctccctcgac
ccggacaccgcgcgcgcctaccacgacgagaccctgcccgccgaaccggccaagaccgcg
catttctgctccatgtgcggtccgaagttctgctcgatgcggatctcccaggacatccgg
gacgagttcggcgacaccatcgaatccctgggcatgcccaccgtcgacgccgtcctcggc
gagcagcacatggcgcatgttttccgcgaacacggctcgcaggtctacctccccgagtaa
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