Corynebacterium sp. Z-1: RIU96_07895
Help
Entry
RIU96_07895 CDS
T11129
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
core Corynebacterium sp. Z-1
Pathway
core03030
DNA replication
core03410
Base excision repair
core03420
Nucleotide excision repair
core03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
core00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RIU96_07895 (polA)
03410 Base excision repair
RIU96_07895 (polA)
03420 Nucleotide excision repair
RIU96_07895 (polA)
03440 Homologous recombination
RIU96_07895 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
core03032
]
RIU96_07895 (polA)
03400 DNA repair and recombination proteins [BR:
core03400
]
RIU96_07895 (polA)
Enzymes [BR:
core01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RIU96_07895 (polA)
DNA replication proteins [BR:
core03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RIU96_07895 (polA)
DNA repair and recombination proteins [BR:
core03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RIU96_07895 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RIU96_07895 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WNI14015
LinkDB
All DBs
Position
1616978..1619626
Genome browser
AA seq
882 aa
AA seq
DB search
MGSVTQRLLLIDGHSMAFRAFFALPAENFSTSGGQHTNAVYGFLSMFANIIAEEKPTHAA
VAFDVGRKTFRTERFPEYKAQREASPPEFKGQVPIIEEVLGELGIVTLSKENYEADDIVA
TLVTEARAGGDFEIVLVSGDRDYIQLVDASTTLLYPMRGVSNMTRFTPESVEEKYGLTPA
QYPDFAALRGDPSDNLPSVPKVGEKTATKWITEYGDLEGLIEHADEIKGVAGNNFRERID
QVRLNRELTQMVTDVELPVGPEDLEMKPADVNAVASSFDDLEFGVNLRERVLAAVPTTGE
APAPETAELADVEIDDAPLDTWLTERDGQGLAVVVTGNGAPGRGDASALAVVDKQRRGVH
KELAELTPAEDSALKAWAESEDPKYLHDAKTVFHMLKGRGITLRGIAHDTAIAAYLLRPG
QRTYELSDVYQRHLQRQLNLGGDQLSLLGDTSLVDAAAAVLELAEELSTQLRGIDSYDLY
ADLELPLVSILAEMEHAGIAVDVDVLEGQLKDFAAKVTQVEEEARQLVDEPSLNLSSPKQ
LSVVLFDKLGLPKTKKTKTGYSTAAGEIEALAEKNPHPFLDKLLAHREYQKMKSTIEGLI
KAVADDGRIHTTFKQTVASTGRLSSVDPNLQNIPVRTEAGRRIRSAFTVGSDYECLLTAD
YSQIEMRVMAHLSQDSGLIEAYREGEDLHNFVGSRVFDVPIDQVTPELRRRVKAMSYGLV
YGLSAYGLSNQLSISAGEAKSIMESYFERFGGVKRYLDNVVEQARRDGYTSTVFGRRRYL
PELISDNRVARENAERAALNAPIQGSAADIIKVAMIRVDRALEPFASRVLLQVHDELVVE
VAPGELTGVREIVEREMDSAITLRVPLEVSAGTGENWDEAAH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ctgggcagcgtgactcaacgccttttgcttatcgacggccactccatggcattccgggcc
ttcttcgcgcttccggcggagaacttctccacctcgggcggccagcacaccaacgcggtg
tacggcttcctctcgatgttcgccaacatcatcgccgaggagaagccgacccacgccgcg
gtcgccttcgacgtggggcgcaaaacgtttcgcacggagcgcttccccgagtacaaggcg
cagcgcgaggcttcgccgccggagttcaagggccaggtgccgatcatcgaggaagtcctg
ggcgagctcggtatcgtgacgctgtcgaaggagaactacgaggcggacgacatcgtcgcc
acgctcgtgaccgaggcgcgcgccgggggcgacttcgagatcgtgctcgtctcgggcgat
cgcgactacattcagcttgtcgacgcctccaccacgctgctctaccccatgcggggcgtg
tccaacatgacgcggtttaccccggagtccgtggaggagaagtacggcctgaccccggcg
cagtaccccgacttcgcggccctgcgtggcgacccgtcggacaacctgccctcggtgccc
aaggtgggggagaagaccgcgaccaagtggatcaccgagtacggcgatctcgaagggctc
atcgagcacgcggacgagatcaagggcgtggcgggcaataacttccgcgagcgcatcgac
caggtgcggctcaaccgcgagctgacgcagatggtcacggacgttgagctgccggtcggc
ccggaggacctggagatgaagccggccgacgtcaacgcggttgccagctcgttcgacgac
ctggagttcggcgtcaacctgcgcgagcgcgtgctcgcggccgtgcccacgacgggagag
gcacccgcgccggagacggccgagctcgccgacgtagagatcgacgacgcgccgctggat
acgtggctcacagagcgcgacggccagggcctcgcggtggtggtgaccggcaacggcgct
cccgggcggggagatgcgtcggcgctggcggtcgtcgataagcagcgccgcggagtccat
aaggagctcgccgagcttactcccgcggaggattccgctttgaaggcctgggccgagtcg
gaggatccgaagtacctgcacgacgcgaagaccgtgttccacatgctcaagggccgcggc
atcaccctgcgtggcatcgcgcacgacacagcgatcgcggcctacctgctgcggcctggc
cagcgcacctacgagctcagcgacgtgtaccagcgccacctgcagcgccagctcaacctc
ggcggcgaccagctcagcctgctcggcgatacctcgctggtggacgcggccgcggcggtg
ctcgagctcgccgaggagctcagcacgcagctgcgcggcatcgactcctacgacttgtac
gccgacctcgagctgccgctggtatcgatcctcgcggagatggagcacgccggcatcgcc
gtggacgtcgacgtgctggagggccagctcaaggacttcgcggccaaggtcacccaggtc
gaggaggaggcccgccagcttgtcgacgagccctcgctgaacctgtcgagccccaagcag
ctctcagtggtcctgtttgacaagttggggctgccgaagacgaagaagaccaagactggg
tattccaccgcggctggcgagatcgaggccctggcggagaagaacccccacccgtttttg
gacaagctgctggcacaccgcgagtaccagaagatgaagtccaccatcgagggcctgatc
aaggcggtcgccgacgacgggcgcatccacaccaccttcaagcagaccgtcgcgtccacg
ggccggctgtcctcggtggacccgaacctgcagaacatcccggtgcgcaccgaagctggt
cggcgcatccgctccgcgtttaccgtgggctccgactacgaatgcctgcttaccgccgat
tactcgcagattgagatgcgcgtgatggcgcacctgtcgcaggactcaggcctgatcgag
gcctaccgcgagggcgaggacctgcacaacttcgtcggctcgcgcgtcttcgatgtgccc
atcgaccaggtcaccccggagctgcgccgccgcgtcaaggccatgtcctacggcctcgtc
tacggcctgtcggcgtacgggttgtccaaccagctctccatctccgcgggcgaggcgaag
agcatcatggagagctactttgagcgcttcggcggggtcaagcgctacctggacaacgtg
gtggagcaggcgcgccgcgatggctacacctccacggtcttcggccggcgccgctacctg
ccggagctgatcagcgacaaccgcgtcgcccgcgaaaacgccgagcgcgccgcactgaac
gcgccgatccagggctcggccgcggacattatcaaggtggcgatgatccgcgtcgaccgc
gcgctggagccgtttgcatcgcgggtgctgctgcaggtccacgacgagctcgtcgtggag
gtcgcgcccggggagctgacgggggtacgcgagatcgtcgagcgcgaaatggactccgcc
attaccttgcgcgtgccgctggaggtctccgccgggacgggtgaaaactgggatgaagca
gcgcactag
DBGET
integrated database retrieval system
