Corynebacterium sp. Z-1: RIU96_09225
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Entry
RIU96_09225 CDS
T11129
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
core Corynebacterium sp. Z-1
Brite
KEGG Orthology (KO) [BR:
core00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
core03000
]
RIU96_09225
Transcription factors [BR:
core03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
RIU96_09225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HVO_A0261_N
HTH_20
Put_DNA-bind_N
HTH_Crp_2
HTH_PafC
HTH_28
DUF8612
HTH_5
DUF4423
FeoC
FaeA
HVO_A0114
Rrf2
MarR_2
MarR
BRCT_3
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
WNI12392
LinkDB
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Position
1887888..1888673
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AA seq
261 aa
AA seq
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MYAEERRRQIASLTAIEGRVNVTELADKFDVTAETIRRDLAVLNREGLIHRVHGGAVASQ
TFSTTEFSLDARSRSASTAKSAIARNALQYLPEQSEGGIFLDSGTSISAFSTLLASDPRA
ASWPIVTNSLPIALELSTAGLPHVQLLGGSVRAITQAVVGAMALRSLALMRADVAFIGTN
ALSVDHGLSTADAQEAAIKTAMVTNARTVVVLCDSTKLGNDYLVSFASLDEIDVLITDSG
APESIVSELSQHGIEVVLAEA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagaggaacgcagacgacagatcgcgtcgttgaccgccattgagggccgcgtc
aacgtcaccgagctggcagacaagtttgacgttactgccgaaacaatccggcgcgaccta
gccgtcctcaaccgtgagggcctgatccaccgcgttcacgggggcgcggtcgccagccag
acgttttccaccaccgagttctcactcgacgcgcgctcgcggtcggcatcgaccgcgaaa
tccgccatcgcccgcaatgcactgcagtacttgccggagcaatccgagggcgggatcttc
ctcgactcggggacgtcgattagcgccttttccaccctgctggcctcggacccgcgcgcg
gcgtcctggccgattgtgaccaactcgctgcccatcgcgctcgagttgtccaccgcgggc
ctgccgcacgtgcagttgctcggcggctcggttcgcgcgattacgcaggctgtcgtcggc
gcgatggcgctgcgctcgctcgccctgatgcgcgccgacgtcgccttcatcggcaccaac
gcgctcagcgtcgaccacggactgtccacggccgatgcccaggaggccgcgattaagacg
gcgatggtcaccaacgcccgcaccgttgttgtgctgtgcgattcgaccaagctcggcaac
gactacctggtcagcttcgcctcgctggacgagatcgacgtcctcatcaccgattccggc
gcaccggagtcgatcgtcagcgagctgtcacagcacggcattgaggtagtcctcgccgag
gcgtag
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