Corynebacterium sp. Z-1: RIU96_09460
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Entry
RIU96_09460 CDS
T11129
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
core Corynebacterium sp. Z-1
Brite
KEGG Orthology (KO) [BR:
core00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
core03016
]
RIU96_09460 (truB)
Enzymes [BR:
core01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RIU96_09460 (truB)
Transfer RNA biogenesis [BR:
core03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RIU96_09460 (truB)
Prokaryotic type
RIU96_09460 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WNI12432
LinkDB
All DBs
Position
1936821..1937723
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AA seq
300 aa
AA seq
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MSFAPDPLASSGIVVVDKPAGMTSHDVVARLRRFFHTRKVGHAGTLDPMATGVLVAGIER
GTKLLAHLVAEDKVYTATIRLGAATTTDDAEGEVTSTADASHITDADIAAGIGELTGDIM
QVPSSVSAIKIGGRRAHELVRSGETVDIPPRAVTVFSFDVLGVRREVSVVDVDVRVHCSK
GTYIRSLARDLGAALGVGGHLTALRRETVGAFTLADSRSLTELENAPTLSLSLDEALTRA
WPVIDVTAAEYEALAMGKWLEPRGTRGVHAAVGPHGRAVALVKEQGKRLSTVFVARPSTL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcccctgacccgcttgccagctccggaatcgttgtggtggacaagcccgcc
gggatgacaagccacgacgtcgtcgcccgcctgcgccgcttcttccacacccgcaaggtg
ggccacgcgggcaccctcgacccgatggcgaccggcgtgcttgtcgccggcatcgagcgc
ggcaccaaactgctcgcccacctagtcgccgaggacaaggtctacaccgcaacgatccgg
ctcggggccgcgaccaccaccgacgacgctgagggcgaggtcacctccaccgccgacgcg
tcccacatcacggacgcagacatcgcggccgggatcggcgagctcaccggcgacatcatg
caggtgccgtcgagcgtctcggcgatcaagatcgggggccggcgcgcccacgagctggtg
cgctcgggcgaaaccgtcgacattccgccacgggcggtcaccgtgtttagcttcgacgtg
ttgggggtgcgtcgtgaagtaagcgttgtcgacgtcgacgtgcgcgtgcactgctcgaag
ggcacctacatccgctcgctggcccgcgacctcggagccgcactcggcgtgggcgggcac
ctcaccgcgctgcgccgcgaaaccgtcggcgcgttcacgctcgccgattcccgcagcctc
accgagctcgagaacgcccccaccctgtcgctgagcctggacgaggcgctgacccgcgcc
tggccggtgatcgacgtcacggccgcggagtacgaggccctggccatgggcaagtggctg
gagccgcggggcacgcgcggtgtacacgccgccgtcggcccccacgggcgcgccgtcgcg
ctagtcaaggagcagggcaagcgcctctcgacggtgttcgtcgcccggccgtccaccctg
tag
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