Corynebacterium sp. Z-1: RIU96_09710
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Entry
RIU96_09710 CDS
T11129
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
core Corynebacterium sp. Z-1
Pathway
core02024
Quorum sensing
core03060
Protein export
core03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
core00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RIU96_09710 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIU96_09710 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RIU96_09710 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
core02044
]
RIU96_09710 (ffh)
Enzymes [BR:
core01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RIU96_09710 (ffh)
Secretion system [BR:
core02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RIU96_09710 (ffh)
Eukaryotic Sec-SRP protein
RIU96_09710 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_16
APS_kinase
CLP1_P
cobW
Zeta_toxin
AAA_25
nSTAND3
AAA_30
MMR_HSR1
MeaB
NPHP3_N
NTPase_1
AAA_31
TsaE
AAA_18
NB-ARC
SRPRB
nSTAND6
Thymidylate_kin
AAA_33
ATP_bind_1
NACHT
ABC_tran
ArsA_ATPase
MobB
AAA
DUF463
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WNI12479
LinkDB
All DBs
Position
complement(1991817..1993448)
Genome browser
AA seq
543 aa
AA seq
DB search
MFESLSDRLQTALGGLRGKGKLTEADINNTAREIRLALLEADVSLTVVRAFIKRVKERSL
GADVSEALNPAQQVIKIVDEELTNILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL
ANHLTKQGHTPMLVACDLQRPGAVQQLQIVGERAGVPTFAPDPGTSLDSLDHEMGTSHGD
PVAVATAGIEHAVRAKNDVVIIDTAGRLGIDETLMTQARNIRDAVNPDEVLFVIDAMIGQ
DAVATAQAFADGVDFTGVVLTKLDGDARGGAALSIREVTGKPILFASTGEKLDDFDIFHP
DRMSSRILGMGDVLSLIEQAETMFDQQEAEKAAARLGSGELTLEDFLDQLLMVRRMGPIG
NLLKMMPGGKQMNEMADMVDEKQLDRIQAIIRGMTPAEREDPKILNASRRKRIANGSGVS
VSDVNQLVERFFEAKKMMGQMASQFGLPGMPGMGGGRSATKKKPKGRKGKNGKRKPVKNR
GGAKPGMPGGMPSMADLQKMQEQLGGGMPGMPGAGKMPPGMEGLDLNNLDFSQAMKNLGK
KGK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagtcgctgtccgaccgcctacaaactgccctcggcggcctgcgcggtaagggc
aagctgaccgaggcagacatcaacaacaccgcccgtgagatccgcctcgcgctgctcgag
gccgatgtttccctcaccgtggtgcgcgcttttattaaacgagtcaaggagcgctccctc
ggcgccgatgtctccgaggcgctcaacccggcgcagcaagtcatcaaaatcgtcgacgag
gagctcaccaacatcctcggcggcgaaacccgccggctcaacctggcgaagaccccgccg
accgtgatcatgctcgccgggctgcagggcgccggtaagactacgctcgccggcaagctg
gcgaaccacctgaccaagcagggccacaccccgatgctggtggcctgcgacctgcagcgc
cccggggcggtgcagcagctgcaaatcgtcggcgagcgcgctggcgtcccgacgttcgcg
ccggaccccggcacgtcgctggattcgctagatcacgagatgggcacctcccacggtgac
cccgtcgccgtggccacggcgggtatcgagcacgccgttcgcgccaagaacgacgtggtc
atcatcgataccgccggtcgcctcggcatcgacgaaaccctgatgacgcaggcgcgcaac
atccgcgacgccgtcaaccccgatgaagtcctcttcgtcatcgacgcgatgatcggccag
gacgccgtcgccaccgcgcaggcgttcgccgacggcgtcgacttcaccggtgtggtgctg
accaagcttgacggcgacgcccgcggcggcgcagcgctgtcgatccgcgaggtcacgggc
aaaccgatcttgttcgcctccacgggtgagaagctcgacgacttcgacatcttccacccc
gaccgcatgtccagccgcatcctcggcatgggcgatgtgctctcgctcatcgagcaggcc
gagaccatgttcgaccagcaggaggccgaaaaggccgccgcgcgcctcggctccggcgag
ctcactttggaggacttcctcgaccagctgctcatggtccgccgcatggggccgatcggc
aacctgctgaagatgatgcccggtggcaagcagatgaacgagatggccgacatggtcgac
gagaagcagctcgaccgcatccaggccatcatccgcggcatgactcccgccgagcgcgag
gacccgaagatcctcaacgcctcgcgccgcaagcgcatcgccaacggttccggcgtgtcc
gtctccgacgtcaaccagctcgtggagcgcttcttcgaggcgaagaagatgatggggcag
atggccagccagttcggcctgcccggcatgcctggaatgggcggggggcgcagcgccacg
aagaagaagccgaagggacgcaagggcaagaacggcaagcgcaagccggtgaagaaccgt
ggcggcgcgaagccgggaatgcccggtggcatgccgagcatggcggacctgcaaaaaatg
caggagcagctgggcgggggtatgcccggtatgcccggagcagggaagatgccgccgggc
atggagggcctcgacctgaataacctcgacttctcccaggcgatgaagaatctggggaag
aaagggaagtag
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